Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq139 964 0.0 seq144 618 2e-174 seq150 583 4e-164 seq132 576 6e-162 seq159 304 5e-80 seq234 262 2e-67 seq55 125 3e-26 >seq139 Length=9664 Score = 964 bits (1068), Expect = 0.0 Identities = 627/685 (92%), Gaps = 3/685 (0%) Strand=Plus/Plus Query 1 TACGTGACCGGTGGCCTA-GCCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAAT 59 |||||| || |||||| ||||||| |||| |||||||||||||||||||||||||||| Sbjct 2568 TACGTGGTCGCTGGCCTTCGCCGTGTAAAGCCCCTTCGACGAGTCGAGTTGTTTGGGAAT 2627 Query 60 GCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGC 119 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 2628 GCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACTGGCCAGAGACCGATAGC 2687 Query 120 GCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTG 179 ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct 2688 GCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTCAAATAGCACGTG 2747 Query 180 AAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCT 239 |||||||||||||||||||||||||| ||||||||||| | ||||||||| |||| | | Sbjct 2748 AAATTGTTGAAAGGGAAGCGCTTGCAGCCAGACTTGCCTGTAGTTGCTCATCCGGGCTTT 2807 Query 240 CGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCC 299 | ||||||||||||||||||| |||||||||||||| ||||||| ||||||||||| Sbjct 2808 TGCCCGGTGCACTCTTCTGCGGGCAGGCCAGCATCAGTCTGGGCGGTTGGATAAAGGCCT 2867 Query 300 CGGGAATGTGGCCCCCTTCGGGG-GGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGG 358 | | |||| | || ||||||| || |||||| | || | ||||| || |||||| Sbjct 2868 CTGTCATGTACCTCCTTTCGGGGAGGCCTTATAGGG-GAGGCGTAATGCAACCAGCCTGG 2926 Query 359 ACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGA 418 |||||||||||||| | ||||||||||||||||||||| |||||||||||||||||| | Sbjct 2927 ACTGAGGTCCGCGCATCTGCTAGGATGCTGGCGTAATGGCTGTAAGCGGCCCGTCTTGAA 2986 Query 419 ACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAA 478 |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct 2987 ACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAGCCCGAGCGCGTAA 3046 Query 479 TGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTC 538 ||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||| Sbjct 3047 TGAAAGTGAACGGAGGTGGGATCCCTTTAGGGTGCACCATCGACCGATCCTGATGTCTTC 3106 Query 539 GGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAA 598 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct 3107 GGATGGATTTGAGTAAGAGCATGGCTGTTGGGACCCGAAAGATGGTGAACTATGCTTGAA 3166 Query 599 TAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGA 658 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 3167 TAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGA 3226 Query 659 TCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||| |||||||||| Sbjct 3227 TCGTCAAATTTGGGCATAGGGGCGA 3251 Score = 111 bits (122), Expect = 7e-22 Identities = 74/81 (91%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 1 TACGTGACCGGTGGCCTA-GCCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAAT 59 |||||| || |||||| ||||||| |||| |||||||||||||||||||||||||||| Sbjct 1269 TACGTGGTCGCTGGCCTTCGCCGTGTAAAGCCCCTTCGACGAGTCGAGTTGTTTGGGAAT 1328 Query 60 GCAGCTCTAAATGGGAGGTAA 80 ||||||||||||||||||||| Sbjct 1329 GCAGCTCTAAATGGGAGGTAA 1349 >seq144 Length=7156 Score = 618 bits (684), Expect = 2e-174 Identities = 538/666 (81%), Gaps = 2/666 (0%) Strand=Plus/Plus Query 19 GCCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGT 78 ||||||| |||| |||||||||||| ||||| ||| ||||| ||||||||||| |||||| Sbjct 3451 GCCGTGTAAAGCCCCTTCGACGAGTTGAGTTATTTAGGAATACAGCTCTAAATAGGAGGT 3510 Query 79 AAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGA 138 |||||||||||||||||||||| | || |||||| |||||| | |||||||||||| || Sbjct 3511 AAATTTCTTCTAAAGCTAAATACTAGCTAGAGACTAATAGCGTATAAGTAGAGTGATTGA 3570 Query 139 AAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGC 198 ||||||||||||||||| |||||||||||||| || ||||||||||||| |||||||||| Sbjct 3571 AAGATGAAAAGCACTTTAGAAAGAGAGTTAAATAGTACGTGAAATTGTTAAAAGGGAAGC 3630 Query 199 GCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTG 258 ||||||| ||||||||||| | |||| || | | | | | | ||||||||||||| Sbjct 3631 GCTTGCAGCCAGACTTGCCTGTAGTTACTTATCTAGGCTTTTACCTGGTGCACTCTTCTA 3690 Query 259 CGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318 ||| |||| || || || ||| ||| |||||||||| | |||| | || ||| Sbjct 3691 CGGGTAGGCTAGTATTAGTCTGGGTGGTTAGATAAAGGCCTCTATTATGTACCTCCTTTC 3750 Query 319 GGGG-GGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGG 377 |||| || |||||| | || | |||| | |||| |||| |||||||||| | | Sbjct 3751 GGGGAGGCCTTATAGGG-GAGGCGTAATGTAACTAGCCTAGACTAAGGTCCGCGCATCTG 3809 Query 378 CTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTA 437 |||||||||| ||||||| | | ||||| ||| ||||| ||||||||| |||||||||| Sbjct 3810 CTAGGATGCTAGCGTAATAGCTATAAGCAGCCTGTCTTAAAACACGGACTAAGGAGTCTA 3869 Query 438 ACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGG 497 | ||||||| |||||||| ||||| || || | ||||||| |||||||| ||||| | Sbjct 3870 ATATCTATGTGAGTGTTTAGGTGTTAAGCCTAAGTGCGTAATAAAAGTGAATAGAGGTAG 3929 Query 498 GAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557 || ||| | ||||||||| || || ||||| || |||| ||| |||||||||||||| Sbjct 3930 GATCCCTTTAGGGTGCACTATTAACTAATCCTAATATCTTTAGATAGATTTGAGTAAGAG 3989 Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617 ||||||||| ||||| |||||| || |||||||| | |||||||| |||| ||||||| Sbjct 3990 TATAGCTGTTAGGACCTAAAAGATAGTAAACTATGCTTAAATAGGGTAAAGCTAGAGGAA 4049 Query 618 ACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAG 677 ||||| ||||||||||| ||||||||| ||||||||| ||| | |||||||||||||| Sbjct 4050 ACTCTAGTGGAGGCTCGTAGCGGTTCTAACGTGCAAATTGATTATTAAATTTGGGTATAG 4109 Query 678 GGGCGA 683 ||||| Sbjct 4110 AGGCGA 4115 >seq150 Length=5836 Score = 583 bits (646), Expect = 4e-164 Identities = 536/674 (80%), Gaps = 3/674 (0%) Strand=Plus/Minus Query 12 TGGCCTA-GCCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA 70 |||||| ||||||| |||| |||| |||||||||||| ||| ||||| |||||||||| Sbjct 2397 TGGCCTTCGCCGTGTAAAGCCCCTTTAACGAGTCGAGTTATTTAGGAATACAGCTCTAAA 2338 Query 71 TGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGA 130 | |||||||||||||||||||||||||||| | || |||||| |||||| | ||||||| Sbjct 2337 TAGGAGGTAAATTTCTTCTAAAGCTAAATACTAGCTAGAGACTAATAGCGTATAAGTAGA 2278 Query 131 GTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAA 190 || || |||||| ||||||||||| |||||||||||||| ||||||| ||||| || || Sbjct 2277 GTAATTAAAAGATAAAAAGCACTTTAGAAAGAGAGTTAAATAGCACGTAAAATTATTAAA 2218 Query 191 AGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCA 250 |||||||||||| || | |||||| || | ||||||| | | | | | | ||||| Sbjct 2217 AGGGAAGCGCTTACAGCTAGACTTACCTGTAGTTGCTTATCTAGGCTTTTACCTAGTGCA 2158 Query 251 CTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGG 310 ||||||| ||| |||| ||||| || |||||| |||||||||| | || | Sbjct 2157 CTCTTCTACGGGTAGGCTAGCATTAGTCTAGGCGGTTAGATAAAGGCCTCTATTATATAC 2098 Query 311 CCCCCTTCGGGG-GGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCG 369 | || ||| ||| || |||||| | || | ||| || ||||||||||||||||| Sbjct 2097 CTCCTTTCAGGGAGGCCTTATAGGG-GAGGCGTAATATAACCAGCCTGGACTGAGGTCCG 2039 Query 370 CGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAA 429 || | |||||||||| | |||| | ||||||||||| |||| || | ||| || Sbjct 2038 CGTATCTACTAGGATGCTAGTATAATAGCTGTAAGCGGCCTATCTTAAAATATAGACTAA 1979 Query 430 GGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAAC 489 ||||||||| |||||| ||||||||| ||||| || || ||||||||| ||||| ||| Sbjct 1978 GGAGTCTAATATCTATACGAGTGTTTAGGTGTTAAGCCTAAGCGCGTAATAAAAGTAAAC 1919 Query 490 GGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTG 549 |||||| ||| ||| | ||||||||| ||| ||| ||||| || |||| ||| ||||| Sbjct 1918 GGAGGTAGGATCCCTTTAGGGTGCACTATCAACCAATCCTAATATCTTTAGATAGATTTA 1859 Query 550 AGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGC 609 |||||||| |||||| || ||||| |||||| ||||||||||| |||||||||| |||| Sbjct 1858 AGTAAGAGTATAGCTATTAGGACCTAAAAGATAGTGAACTATGCTTGAATAGGGTAAAGC 1799 Query 610 CAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTT 669 |||||||||||| ||||||||||||||||||||| |||| |||| |||||| |||||| Sbjct 1798 TAGAGGAAACTCTAGTGGAGGCTCGCAGCGGTTCTAACGTGTAAATTGATCGTTAAATTT 1739 Query 670 GGGTATAGGGGCGA 683 ||| ||||||| || Sbjct 1738 GGGCATAGGGGTGA 1725 >seq132 Length=15117 Score = 576 bits (638), Expect = 6e-162 Identities = 541/685 (79%), Gaps = 3/685 (0%) Strand=Plus/Plus Query 1 TACGTGACCGGTGGCCTA-GCCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAAT 59 ||||| || |||||| ||||||| |||| |||| ||||||| |||| ||| ||||| Sbjct 3429 TACGTAGTCGCTGGCCTTCGCCGTGTAAAGCCCCTTTGACGAGTTAAGTTATTTAGGAAT 3488 Query 60 GCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGC 119 | |||||||||| |||||||||||||||||||||||||||| | || |||||| ||||| Sbjct 3489 GTAGCTCTAAATAGGAGGTAAATTTCTTCTAAAGCTAAATACTAGCTAGAGACTAATAGC 3548 Query 120 GCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTG 179 | | |||||||||||| ||||||||||||||||||| |||||||||||||| |||||||| Sbjct 3549 GTATAAGTAGAGTGATTGAAAGATGAAAAGCACTTTAGAAAGAGAGTTAAATAGCACGTG 3608 Query 180 AAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCT 239 ||||| || ||||||||||||||||| | ||||||||| |||| || | | | | | Sbjct 3609 AAATTATTAAAAGGGAAGCGCTTGCAGCTAGACTTGCCTATAGTTACTTATCTAGGCTTT 3668 Query 240 CGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCC 299 | | |||| |||||||||||| |||| || || || ||||||| |||||||||| Sbjct 3669 TGCCTGGTGTACTCTTCTGCGGGTAGGCTAGTATTAGTCTGGGCGGTTAGATAAAGGCCT 3728 Query 300 CGGGAATGTGGCCCCCTTCGGGG-GGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGG 358 | || | | || ||||||| || |||||| | || | |||| | |||| | Sbjct 3729 CTATTATATACCTCCTTTCGGGGAGGCCTTATAGGG-GAGGCGTAATGTAACTAGCCTAG 3787 Query 359 ACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGA 418 ||| ||||||||| | ||||||||||| ||||||| | | ||||||||| |||| | Sbjct 3788 ACTAAGGTCCGCGTATCTGCTAGGATGCTAGCGTAATAGCTATAAGCGGCCTATCTTAAA 3847 Query 419 ACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAA 478 | | |||| ||||||||||| ||||||| ||||||| ||| | || || ||| |||| Sbjct 3848 ATATGGACTAAGGAGTCTAATATCTATGTAAGTGTTTAGGTATTAAGCCTAAGCGTGTAA 3907 Query 479 TGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTC 538 | ||||| ||||||||||||| ||| | |||||| || || || ||||| || |||| Sbjct 3908 TAAAAGTAAACGGAGGTGGGATCCCTTTAGGGTGTACTATTAACTAATCCTAATATCTTT 3967 Query 539 GGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAA 598 |||| ||||| |||||||| |||||| || ||||| ||||||| ||||||||| | | || Sbjct 3968 GGATAGATTTAAGTAAGAGTATAGCTATTAGGACCTGAAAGATAGTGAACTATACTTAAA 4027 Query 599 TAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGA 658 ||||||||||| |||||||||||| || |||||| ||||||||| |||| |||| | Sbjct 4028 TAGGGTGAAGCTAGAGGAAACTCTAGTAGAGGCTTATAGCGGTTCTAACGTGTAAATTAA 4087 Query 659 TCGTCAAATTTGGGTATAGGGGCGA 683 |||| |||||| || |||||||||| Sbjct 4088 TCGTTAAATTTAGGCATAGGGGCGA 4112 Score = 576 bits (638), Expect = 6e-162 Identities = 541/685 (79%), Gaps = 3/685 (0%) Strand=Plus/Plus Query 1 TACGTGACCGGTGGCCTA-GCCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAAT 59 ||||| || |||||| ||||||| |||| ||||||||||||| |||| ||| ||||| Sbjct 11734 TACGTAGTCGCTGGCCTTCGCCGTGTAAAGCCCCTTCGACGAGTCAAGTTATTTAGGAAT 11793 Query 60 GCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGC 119 |||||||||| |||||||||||||||||||||||||||| | || ||||||| |||| Sbjct 11794 ATAGCTCTAAATAGGAGGTAAATTTCTTCTAAAGCTAAATACTAGCTAGAGACCAATAGT 11853 Query 120 GCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTG 179 | |||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct 11854 ATATAAGTAGAGTGATCGAAAGATGAAAAGCACTTTAGAAAGAGAGTTAAATAGCACGTG 11913 Query 180 AAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCT 239 |||||||| ||||||||||||||||| | |||||| || | |||| || | | | | | Sbjct 11914 AAATTGTTAAAAGGGAAGCGCTTGCAGCTAGACTTACCTGTAGTTACTTATCTAGGCTTT 11973 Query 240 CGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCC 299 | |||||||||||||||| |||| || || || || || ||||||||||| Sbjct 11974 TACCTAGTGCACTCTTCTGCGGGTAGGCTAGTATTAGTCTAGGTAGTTGGATAAAGGCCT 12033 Query 300 CGGGAATGTGGCCCCCTTCGGGG-GGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGG 358 | | |||| | || || ||| || |||||| | ||| |||| | |||| | Sbjct 12034 CTGTTATGTACCTCCTTTTAGGGAGGCCTTATAGGG-GAGGTATAATGTAACTAGCCTAG 12092 Query 359 ACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGA 418 ||| ||||| | | | ||||||||||| | |||| | ||||||||||||||||| | Sbjct 12093 ACTAAGGTCTGTGTATCTGCTAGGATGCTAGTATAATAGCTGTAAGCGGCCCGTCTTAAA 12152 Query 419 ACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAA 478 | |||||| ||||||||||| ||||||| |||| ||| ||||| || || | |||||||| Sbjct 12153 ATACGGACTAAGGAGTCTAATATCTATGTGAGTATTTAGGTGTTAAGCCTGAGCGCGTAA 12212 Query 479 TGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTC 538 | |||||||| ||||| ||| ||| | ||||||||| || || ||||| ||||||| Sbjct 12213 TAAAAGTGAATAGAGGTAGGATCCCTTTAGGGTGCACTATTAACTAATCCTAATGTCTTT 12272 Query 539 GGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAA 598 ||| ||||| |||||||| |||||| || ||||| |||||| ||||||||| | | || Sbjct 12273 AGATAGATTTAAGTAAGAGTATAGCTATTAGGACCTAAAAGATAGTGAACTATACTTAAA 12332 Query 599 TAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGA 658 ||||||||||| |||||||||||| || |||||| |||||||||| |||| |||| | Sbjct 12333 TAGGGTGAAGCTAGAGGAAACTCTAGTAGAGGCTTACAGCGGTTCTAACGTGTAAATTAA 12392 Query 659 TCGTCAAATTTGGGTATAGGGGCGA 683 | | |||||| ||||||||||||| Sbjct 12393 TTATTAAATTTAGGTATAGGGGCGA 12417 >seq159 Length=3617 Score = 304 bits (336), Expect = 5e-80 Identities = 421/587 (72%), Gaps = 2/587 (0%) Strand=Plus/Plus Query 27 AAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCT 86 |||| |||| | ||| |||| ||| ||||| |||||||||| |||||||||||||| Sbjct 3032 AAGCCCCTTTAATAAGTTAAGTTATTTAGGAATATAGCTCTAAATAGGAGGTAAATTTCT 3091 Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 |||||||||||||| | || |||||| |||||| | ||||||||| || |||||| || Sbjct 3092 TCTAAAGCTAAATACTAGCTAGAGACTAATAGCGTATAAGTAGAGTAATTAAAAGATAAA 3151 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206 ||| ||||| |||||||||||||| || || ||||||| || |||||||||||||| | Sbjct 3152 AAGTACTTTAGAAAGAGAGTTAAATAGTACATGAAATTATTAAAAGGGAAGCGCTTATAG 3211 Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGG 266 | |||||| || |||| || | | | | | | || |||||||| | ||| Sbjct 3212 CTAGACTTACCTATAGTTACTTATCTAGGCTTTTACCTAGTATACTCTTCTATAGGTAGG 3271 Query 267 CCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGC-CCCCTTCGGGGGGT 325 | || || || || || |||||||||| | || | | || || ||| || Sbjct 3272 CTAGTATTAGTCTAGGTAGTTAGATAAAGGCCTCTATTATATACCTCCTTTTAGGGAGGC 3331 Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385 |||||| | || | ||| | |||| |||| ||||| | ||||||| Sbjct 3332 CTTATAG-GGGAGGCGTAATATAACTAGCCTAGACTAAGGTCTATATATCTACTAGGATA 3390 Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445 || ||||||| | | ||||| ||| |||| || | ||| ||||||||||| |||||| Sbjct 3391 CTAGCGTAATAGCTATAAGCAGCCTATCTTAAAATATAGACTAAGGAGTCTAATATCTAT 3450 Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505 ||| ||| ||| | || || ||||||||| ||||| || ||||| ||| ||| | Sbjct 3451 ATAAGTATTTAGGTATTAAGCCTAAGCGCGTAATAAAAGTAAATAGAGGTAGGATCCCTT 3510 Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565 ||||| || || || ||||| || |||| ||| ||||| |||||||| |||||| Sbjct 3511 TAGGGTATACTATTAACTAATCCTAATATCTTTAGATAGATTTAAGTAAGAGTATAGCTA 3570 Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 612 || ||||| |||||| || |||||| | | |||||||| |||| || Sbjct 3571 TTAGGACCTAAAAGATAGTAAACTATACTTAAATAGGGTAAAGCTAG 3617 >seq234 Length=1183 Score = 262 bits (290), Expect = 2e-67 Identities = 410/584 (70%), Gaps = 2/584 (0%) Strand=Plus/Minus Query 27 AAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCT 86 |||| |||| | ||| |||| ||| ||||| |||||||||| |||||||||||||| Sbjct 586 AAGCCCCTTTAATAAGTTAAGTTATTTAGGAATATAGCTCTAAATAGGAGGTAAATTTCT 527 Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 |||||||||||||| | || |||||| |||| | ||||||||| || |||||| || Sbjct 526 TCTAAAGCTAAATACTAGCTAGAGACTAATAGTATATAAGTAGAGTAATTAAAAGATAAA 467 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206 ||| ||||| |||||||||||||| || | | ||||| || |||||||||||||| | Sbjct 466 AAGTACTTTAGAAAGAGAGTTAAATAGTATATAAAATTATTAAAAGGGAAGCGCTTATAG 407 Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGG 266 | |||||| || |||| || | | | | | | || |||||||| | ||| Sbjct 406 CTAGACTTACCTATAGTTACTTATCTAGGCTTTTACCTAGTATACTCTTCTATAGGTAGG 347 Query 267 CCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGC-CCCCTTCGGGGGGT 325 | || || | || || |||||||||| | || | | || || ||| || Sbjct 346 CTAGTATTATTCTAGGTAGTTAGATAAAGGCCTCTATTATATACCTCCTTTTAGGGAGGC 287 Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385 |||||| | || | ||| | |||| |||| ||||| | ||||||| Sbjct 286 CTTATAG-GGGAGGCGTAATATAACTAGCCTAGACTAAGGTCTATATATCTACTAGGATA 228 Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445 || ||||||| | | ||||||||| |||| || | ||| ||||||||||| |||||| Sbjct 227 CTAGCGTAATAGCTATAAGCGGCCTATCTTAAAATATAGACTAAGGAGTCTAATATCTAT 168 Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505 ||| ||| ||| | || || | |||| ||||| || ||||| ||| ||| | Sbjct 167 ATAAGTATTTAGGTATTAAGCCTAAGTATATAATAAAAGTAAATAGAGGTAGGATCCCTT 108 Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565 ||||| || || || || || || |||| ||| ||||| |||||||| |||||| Sbjct 107 TAGGGTATACTATTAACTAATTCTAATATCTTTAGATAGATTTAAGTAAGAGTATAGCTA 48 Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGC 609 || ||||| |||||| || |||||| | | |||||||| |||| Sbjct 47 TTAGGACCTAAAAGATAGTAAACTATACTTAAATAGGGTAAAGC 4 >seq55 Length=216537 Score = 125 bits (138), Expect = 3e-26 Identities = 74/77 (96%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 607 AGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAA 666 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 153490 AGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAA 153431 Query 667 TTTGGGTATAGGGGCGA 683 | |||| |||||||||| Sbjct 153430 TCTGGGCATAGGGGCGA 153414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079994551700