Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq139 352 5e-95 seq132 289 5e-76 seq150 253 3e-65 seq144 219 7e-55 seq159 179 6e-43 >seq139 Length=9664 Score = 352 bits (390), Expect = 5e-95 Identities = 233/257 (91%), Gaps = 1/257 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 265 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 206 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| || Sbjct 205 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 147 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| ||| || ||||||||||||||||||||||||||||||||||| |||||| Sbjct 146 ACCAGCCAAAGCTAGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 87 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 86 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCTGAAAAATCAAGAA 27 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 26 AGAGCTCTCAATCTGTC 10 Score = 255 bits (282), Expect = 9e-66 Identities = 172/191 (90%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1564 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 1505 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| |||| | |||| ||||||||||||||||||| || Sbjct 1504 CCTGTTATTGCCTCAAACTTCCATCGGCTTG-AGCCGATAGTCCCTCTAAGAAGCCGGCG 1446 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| ||| || ||||||||||||||||||||||||||||||||||| |||||| Sbjct 1445 ACCAGCCAAAGCTAGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 1386 Query 182 CCAGACAAATC 192 |||||||||| Sbjct 1385 GCAGACAAATC 1375 Score = 96.9 bits (106), Expect = 6e-18 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 193 ACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAA 252 ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||| Sbjct 9114 ACTCCACCAACTAAGAACGGCCATGCACCACCACCTGAAAAATCAAGAAAGAGCTCTCAA 9055 Query 253 TCTGTC 258 |||||| Sbjct 9054 TCTGTC 9049 >seq132 Length=15117 Score = 289 bits (320), Expect = 5e-76 Identities = 220/258 (85%), Gaps = 9/258 (3%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| | |||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2425 ACTCGTTAGCTCTGTTAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 2366 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||| ||||| ||||||||||||||| ||| ||||| |||||||||||||||||||||| Sbjct 2365 CCTATTATTACCTCAAACTTCCATTAGCTT-AAGCCGATAGTCCCTCTAAGAAGCCAGCG 2307 Query 122 ACCAACCA----TAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 || | | | ||| | | |||||||||||||||||||||||||||||||||| || Sbjct 2306 ACTAGCTAAAGCTAGCCTA----GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAA 2251 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 |||| ||| |||| ||||||| ||||||||||||| || ||| || ||| | | ||||| Sbjct 2250 TTAAGTAGATAAATTACTCCACTAACTAAGAACGGCTATACACTACTACCTAAAAAATCA 2191 Query 238 AGAAAGAGCTATCAATCT 255 |||||||||| ||||||| Sbjct 2190 AGAAAGAGCTCTCAATCT 2173 Score = 266 bits (294), Expect = 5e-69 Identities = 215/258 (83%), Gaps = 9/258 (3%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| | |||| || ||| ||||||||||||||||||||| ||||||||| || ||||| Sbjct 10730 ACTCGTTAGCTCTGTTAGTATAGCGCGCGTGCGGCCCAGAATATCTAAGGGTATTACAGA 10671 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||||||||| ||||||||||| ||| ||| |||| ||||||||||||||||||||||| Sbjct 10670 CCTGTTATTACCTCAAACTTCTATTAGCTT-AAGCTAATAGTCCCTCTAAGAAGCCAGCG 10612 Query 122 ACCAACCA----TAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 || | | | ||| | | ||||||||| |||||||||||||||||||||||| || Sbjct 10611 ACTAGCTAAAGCTAGCCTA----GCTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAA 10556 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 |||| ||| |||||||||||| |||||||||| || ||||||||| ||| | | ||| | Sbjct 10555 TTAAGTAGATAAATCACTCCACTAACTAAGAACAGCTATGCACCACTACCTAAAAAATTA 10496 Query 238 AGAAAGAGCTATCAATCT 255 |||||||||| | ||||| Sbjct 10495 AGAAAGAGCTCTTAATCT 10478 >seq150 Length=5836 Score = 253 bits (280), Expect = 3e-65 Identities = 212/258 (82%), Gaps = 9/258 (3%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| || ||| |||||| ||||||||| ||||||||||||||||| | ||| Sbjct 3412 ACTCGTTGGCTCTGTTAGTATAGCGCACGTGCGGCCTAGAACATCTAAGGGCATTATAGA 3471 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||| ||||| ||| ||||||| ||| ||| |||| ||||||||||||||||||| ||| Sbjct 3472 CCTATTATTACCTTAAACTTCTATTAGCTT-AAGCTAATAGTCCCTCTAAGAAGCTAGCG 3530 Query 122 ACCAACCA----TAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 || | | | ||| | | ||||||||||||||||||||||||||||||||| || Sbjct 3531 ACTAGCTAAAGCTAGCCTA----GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCACAA 3586 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 |||| |||||||||||||| || ||||||||| || || ||||||||| | | ||||| Sbjct 3587 TTAAGCAGACAAATCACTCTACTAACTAAGAATAGCTATATACCACCACCTAAAAAATCA 3646 Query 238 AGAAAGAGCTATCAATCT 255 |||||||||| | ||||| Sbjct 3647 AGAAAGAGCTCTTAATCT 3664 >seq144 Length=7156 Score = 219 bits (242), Expect = 7e-55 Identities = 201/252 (80%), Gaps = 9/252 (4%) Strand=Plus/Minus Query 10 GCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTAT 69 |||| | |||||||||||||||||||| |||| ||||||||| || | |||||| |||| Sbjct 2420 GCTCTATTAGTGTAGCGCGCGTGCGGCCTAGAATATCTAAGGGTATTATAGACCTATTAT 2361 Query 70 TGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCA 129 ||||| ||||||| || |||| |||| ||||||||||||||||||| || || | | | Sbjct 2360 TGCCTTAAACTTCTATCGGCTT-AAGCTGATAGTCCCTCTAAGAAGCCGGCGACTAGCTA 2302 Query 130 ----TAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAG 185 ||| | | ||||||||| |||||||||||| || ||||||| |||||| || Sbjct 2301 AAGCTAGCCTA----GCTATTTAGTAGGTTAAGGTCTTATTTGTTATCGTAATTAAGTAG 2246 Query 186 ACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAG 245 | ||||||||| || ||||||||||||| || ||| || ||| | | ||| ||||||||| Sbjct 2245 ATAAATCACTCTACTAACTAAGAACGGCTATACACTACTACCTAAAAAATTAAGAAAGAG 2186 Query 246 CTATCAATCTGT 257 || | ||||||| Sbjct 2185 CTCTTAATCTGT 2174 >seq159 Length=3617 Score = 179 bits (198), Expect = 6e-43 Identities = 191/250 (76%), Gaps = 9/250 (4%) Strand=Plus/Minus Query 10 GCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTAT 69 |||| | ||| ||| ||||| ||||| |||| ||||||||| || | |||||| |||| Sbjct 1994 GCTCTATTAGTATAGTACGCGTACGGCCTAGAATATCTAAGGGTATTATAGACCTATTAT 1935 Query 70 TGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCA 129 | ||| ||||||| ||| ||| |||| ||||||||||||||||||| ||| || | | | Sbjct 1934 TACCTTAAACTTCTATTAGCTT-AAGCTAATAGTCCCTCTAAGAAGCTAGCGACTAGCTA 1876 Query 130 ----TAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAG 185 ||| | | ||||||||| |||||||||||| |||||||| |||||| || Sbjct 1875 AAGCTAGCCTA----GCTATTTAGTAGGTTAAGGTCTTATTCGTTATTATAATTAAGTAG 1820 Query 186 ACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAG 245 | |||| |||| || ||||||||| || || ||| || ||| | | ||| ||||||||| Sbjct 1819 ATAAATTACTCTACTAACTAAGAATAGCTATACACTACTACCTAAAAAATTAAGAAAGAG 1760 Query 246 CTATCAATCT 255 || | ||||| Sbjct 1759 CTCTTAATCT 1750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796798039374