Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq139 511 8e-143 seq187 497 2e-138 seq132 389 7e-106 seq226 379 3e-103 seq144 361 9e-98 seq172 271 1e-70 >seq139 Length=9664 Score = 511 bits (566), Expect = 8e-143 Identities = 291/295 (99%), Gaps = 1/295 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct 5335 TACTAAGCGGTATTACCATTGGGGCAA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 5277 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5276 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 5217 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5216 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 5157 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5156 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 5097 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5096 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 5042 >seq187 Length=2133 Score = 497 bits (550), Expect = 2e-138 Identities = 288/295 (98%), Gaps = 1/295 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||| |||||||| ||| ||||| |||||||||||||||||||||||||||||||| Sbjct 617 TACTAAATTGAATTACCGTTGCGGCGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 559 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 558 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 499 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 498 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 439 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 438 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 379 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 378 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 324 >seq132 Length=15117 Score = 389 bits (430), Expect = 7e-106 Identities = 264/295 (89%), Gaps = 1/295 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||||| ||||| ||| |||| | |||||||||||||||||||||||||||||| | Sbjct 14501 TACTAAGCGGTATTACTATTAGGGCAA-GGTCATCAGTAGGGTAAAACTAACCTGTCTTA 14443 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| | Sbjct 14442 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTAGGTGAACAATCTAACGCTTACCAA 14383 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||| ||| |||| |||||||||||||| || ||||||||||||||||| ||||||| Sbjct 14382 ATTCTACTTTAGTATAATAGGAAGAGCCGATATTAAAGGATCAAAAAGCAACATCGCTAT 14323 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||| ||||||| |||| |||||||||| | ||||||||||| ||||||||||||| Sbjct 14322 AAACGCTTAGCTGCCATAAGCTAGTTATCCCTATAGTAACTTTTCTAGCACCTCTAGCCT 14263 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||| |||||||||||||| |||||||||||||| || |||||||||||| Sbjct 14262 CAAATTTTAAGGGACTAAAGGATTAATAGGCCACACTTTTATAGTTTGTATTCAC 14208 Score = 334 bits (370), Expect = 1e-89 Identities = 252/295 (85%), Gaps = 1/295 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||||| ||||| ||| |||| | ||| || ||||||||||||||||||| ||||| Sbjct 6196 TACTAAGCGGTATTACTATTAGGGCAA-GGTTATTAGTAGGGTAAAACTAACCTATCTCA 6138 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||| || |||||||||||| ||| || |||| ||| ||||| | Sbjct 6137 CAACGGTCTAAACCCAGCTTACATTCCCTATTAGTAGGTAAATAATCTAACACTTACTAA 6078 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||| |||| ||||||||||| | || |||||| |||||| ||||||||||| Sbjct 6077 ATTCTGCTTTAGTATAATAGGAAGAGCTAATATTAAAGGATTAAAAAGTAACGTCGCTAT 6018 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||| |||||||| |||||||||| | ||||||||||| ||||||||||||| Sbjct 6017 AAACGCTTGGCTACCACAAGCTAGTTATCCCTATAGTAACTTTTCTAGCACCTCTAGCCT 5958 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||| |||||||||||||| |||||||||||||| || |||| ||||||| Sbjct 5957 TAAATTTTAAGGGACTAAAGGATTAATAGGCCACACTTTTATAGTTTATATTCAC 5903 >seq226 Length=1320 Score = 379 bits (420), Expect = 3e-103 Identities = 262/295 (89%), Gaps = 1/295 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||||| ||||| ||| ||| | ||| || ||||||||||||||||||| ||||| Sbjct 785 TACTAAGCGGTATTACTATTAGGGTAA-GGTTATTAGTAGGGTAAAACTAACCTATCTCA 727 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||| |||| ||||||||||||||| |||||| |||| |||||||||| | Sbjct 726 CGACGGTCTAAACCTAGCTTACGTTCCCTATTAGTAGGTGAATAATCTAACGCTTACCAA 667 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||| |||| ||||||||||| | ||||||||||||||||||||||||||||| Sbjct 666 ATTCTGCTTTAGTATAATAGGAAGAGCTAATATCGAAGGATCAAAAAGCAACGTCGCTAT 607 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||| ||||||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct 606 AAACGCTTAGCTGCCATAAGCCAGTTATCCCTGTAGTAACTTTTCTAGCACCTCTAGCCT 547 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||| |||||| ||||||| || |||||||||||| Sbjct 546 TAAATTTCGAGGGACTAAAGGATTAATAGGCTACACTTTTATAGTTTGTATTCAC 492 >seq144 Length=7156 Score = 361 bits (400), Expect = 9e-98 Identities = 258/295 (87%), Gaps = 1/295 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| | ||||| ||| |||| | |||||| ||||||||||||||||||| ||||| Sbjct 6199 TACTAAGCAGTATTACTATTAGGGCAA-GGTCATTAGTAGGGTAAAACTAACCTATCTCA 6141 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 |||||||||||| |||||||||||||||||||| |||||| |||| ||||||||| | Sbjct 6140 CAACGGTCTAAACCTAGCTCACGTTCCCTATTAGTAGGTGAATAATCTAACGCTTACTAA 6081 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||| ||| |||| |||||||||||| ||||||||||||||||||||||||||||||| Sbjct 6080 ATTCTACTTTAGTATAATAGGAAGAGCCAACATCGAAGGATCAAAAAGCAACGTCGCTAT 6021 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||| ||||||| |||| |||||||||| | ||||||||||| ||||||||||||| Sbjct 6020 AAACGCTTAGCTGCCATAAGCTAGTTATCCCTATAGTAACTTTTCTAGCACCTCTAGCCT 5961 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||| |||||||||||||| |||||||||||||| || |||| |||| || Sbjct 5960 TAAATTTTAAGGGACTAAAGGATTAATAGGCCACACTTTTATAGTTTATATTTAC 5906 >seq172 Length=2810 Score = 271 bits (300), Expect = 1e-70 Identities = 238/295 (81%), Gaps = 1/295 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| | ||||| ||| ||| | ||| || ||||||||||||||||||| ||| | Sbjct 2154 TACTAAGTAGTATTACTATTAGGGTAA-GGTTATTAGTAGGGTAAAACTAACCTATCTTA 2096 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 | | ||||||||| |||| ||||||||||||||| ||| || |||| || ||||| | Sbjct 2095 TAATAGTCTAAACCTAGCTTACGTTCCCTATTAGTAGGTAAATAATCTAATACTTACTAA 2036 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||| ||| |||| ||||||||||| | || |||||| |||||||||||||||||| Sbjct 2035 ATTCTACTTTAGTATAATAGGAAGAGCTAATATTAAAGGATTAAAAAGCAACGTCGCTAT 1976 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||| ||| | | |||| |||||||||| | ||||||||||| | ||||||||||| Sbjct 1975 AAACGCTTAGCTACTATAAGCTAGTTATCCCTATAGTAACTTTTCTAGTACCTCTAGCCT 1916 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||| |||||||||||||| |||||| | ||||| || ||| |||| || Sbjct 1915 TAAATTTTAAGGGACTAAAGGATTAATAGGCTATACTTTTATATTTTATATTTAC 1861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854397829824