Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq139 170 2e-40
seq132 134 2e-29
seq150 125 9e-27
seq144 104 3e-20
seq159 95.1 1e-17
seq191 91.5 2e-16
>seq139
Length=9664
Score = 170 bits (188), Expect = 2e-40
Identities = 171/214 (80%), Gaps = 6/214 (3%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct 8659 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTATTATTCCATGCTAACGTATTCG 8600
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| | |||||||||||||||||||||||| |||| ||||||||||||| ||| | ||
Sbjct 8599 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGG-TCCCCAACA 8541
Query 126 C-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183
| ||| |||| ||||| || || ||| ||| ||| | || ||||| |||
Sbjct 8540 CGCCCAGTGAAGGGCAT-GAGGTTCTCCAGAAGGAAGGCCCGGCCGGACAAGTACACGCG 8482
Query 184 GTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
|||||||||||| | || ||| |||| ||||||
Sbjct 8481 GTGAGGCGGACC-TGCCAGCCAGGCCCAAGTTTC 8449
>seq132
Length=15117
Score = 134 bits (148), Expect = 2e-29
Identities = 148/192 (77%), Gaps = 4/192 (2%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||
Sbjct 1780 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTATTATTCTATGCTAACGTATTCA 1721
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
| | ||||||||| |||||||||||||| | || ||||||||||| | ||| | ||
Sbjct 1720 AGTAAAGGCCTGCTTTAAACACTCTAATTTTTTTAAAGTAAAAGTCCTAG-TCCCCAACA 1662
Query 126 CACC-AATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183
| || | |||| ||||| || || | | ||| ||| || | ||||| |||
Sbjct 1661 CGCCTAGTGAAGGGCAT-GAGGTTCTCTAGAAGGAAGGCCTAGCCGGACAAGTACACGCG 1603
Query 184 GTGAGGCGGACC 195
||||||||||||
Sbjct 1602 GTGAGGCGGACC 1591
Score = 116 bits (128), Expect = 4e-24
Identities = 144/192 (75%), Gaps = 4/192 (2%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
|||||||| || ||||||| | ||| |||||||||||||||| || |||| |||||
Sbjct 10085 CTAGAAACTAATAAAATAGAACCACACATCCTATTCTATTATTCTATACTAACGTATTTA 10026
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| | |||| |||| || ||||||||||| |||| ||||||||||| || ||| ||
Sbjct 10025 AGCAAAGGCCTACTTTAAATACTCTAATTTTTTCAAAGTAAAAGTCCTAGTCCCT-AACA 9967
Query 126 CACC-AATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183
|||| | |||| |||||| || || | | ||| ||| | || ||||| |||
Sbjct 9966 CACCTAGTGAAGGGCATA-AGGTTCTCTAGAAGGAAGGCCCGGCCGGACAAGTACACGCG 9908
Query 184 GTGAGGCGGACC 195
||||||||||||
Sbjct 9907 GTGAGGCGGACC 9896
>seq150
Length=5836
Score = 125 bits (138), Expect = 9e-27
Identities = 146/192 (76%), Gaps = 4/192 (2%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
|||||||| |||||||||| |||||||||||||||||||||| ||||||| |||||
Sbjct 4057 CTAGAAACTAACAAAATAGAACCGCACGTCCTATTCTATTATTCTATGCTAACGTATTTA 4116
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
| | |||| |||| |||||||||||||| | || ||||||||||| | ||| | ||
Sbjct 4117 AGTAAAGGCCTACTTTAAACACTCTAATTTTTTTAAAGTAAAAGTCCTAG-TCCCCAACA 4175
Query 126 CACC-AATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183
|||| | |||| |||||| || || | | ||| ||| | || ||||| |||
Sbjct 4176 CACCTAGTGAAGGGCATA-AGGTTCTCTAGAAGGAAGGCCCGGCCGGACAAGTACACGCA 4234
Query 184 GTGAGGCGGACC 195
|| |||||||||
Sbjct 4235 GTAAGGCGGACC 4246
>seq144
Length=7156
Score = 104 bits (114), Expect = 3e-20
Identities = 144/196 (73%), Gaps = 12/196 (6%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
|||||||| || ||||||| || | ||||||||||||||||| || |||| |||||
Sbjct 1783 CTAGAAACTAATAAAATAGAACCGTATGTCCTATTCTATTATTCTATACTAACGTATTTA 1724
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
| | |||| |||| |||||||||||||| | || ||||||||||| || ||| |
Sbjct 1723 AGTAAAGGCCTACTTTAAACACTCTAATTTTTTTAAAGTAAAAGTCCTAGTCCCT-AATA 1665
Query 126 CACC-AATGAA-GGCATACGGGCTCACCAAGAGGTAGG----GCTGGGTAATGCAGTACT 179
| || | |||| || ||| || || | | ||| ||| ||||| || |||||
Sbjct 1664 CGCCTAGTGAAGGGTATA-AGGTTCTCTAGAAGGAAGGCCTAGCTGGATA----AGTACA 1610
Query 180 CGCCGTGAGGCGGACC 195
||| ||||||||||||
Sbjct 1609 CGCGGTGAGGCGGACC 1594
>seq159
Length=3617
Score = 95.1 bits (104), Expect = 1e-17
Identities = 90/115 (78%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
|||||||| || ||||||| ||||||||||||||||||| || ||||| ||||
Sbjct 1357 CTAGAAACTAATAAAATAGAACTATACGTCCTATTCTATTATTCTATACTAATATATTTA 1298
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
| | |||| |||| |||||||||||||| | || |||||||| || ||||||
Sbjct 1297 AGTAAAGGCCTACTTTAAACACTCTAATTTTTTTAAAGTAAAAGTTCTAGTTCCT 1243
>seq191
Length=1964
Score = 91.5 bits (100), Expect = 2e-16
Identities = 89/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
|||||||| || ||||||| ||||||||||||||||||| || |||| |||||
Sbjct 1827 CTAGAAACTAATAAAATAGAACTATACGTCCTATTCTATTATTCTATACTAACGTATTTA 1768
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
| | |||| |||| || ||||||||||| | || ||||||||||| || |||
Sbjct 1767 AGTAAAGGCCTACTTTAAATACTCTAATTTTTTTAAAGTAAAAGTCCTAGTCCCT 1713
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595198535436
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |