Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq139 288 1e-75
seq132 224 1e-56
seq150 210 2e-52
seq144 179 4e-43
seq191 170 2e-40
seq159 170 2e-40
>seq139
Length=9664
Score = 288 bits (318), Expect = 1e-75
Identities = 179/191 (94%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 8546 GGGACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 8605
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 8606 CGTTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG- 8664
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||| ||||||||| ||||||||||||||||| |||||||||||
Sbjct 8665 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 8724
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 8725 TTGGATTTATT 8735
>seq132
Length=15117
Score = 224 bits (248), Expect = 1e-56
Identities = 165/191 (86%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|| || |||||||||||||| |||||||||||| ||| ||||||||||||| || |||||
Sbjct 1667 GGGACTAGGACTTTTACTTTAAAAAAATTAGAGTGTTTAAAGCAGGCCTTTACTTGAATA 1726
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
| ||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1727 CGTTAGCATAGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG- 1785
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
| |||| || |||| ||||||| ||||| | |||||| |||||| | |||| ||||||
Sbjct 1786 CTATAATAATTAATAGGGATAGTTGGGGGCATTAGTATTTAATTGTTAGAGGTAAAATTC 1845
Query 181 TTGGATTTATT 191
|| ||||||||
Sbjct 1846 TTAGATTTATT 1856
Score = 192 bits (212), Expect = 6e-47
Identities = 158/191 (83%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|| || ||||||||||||||||||||||||||| || |||| ||||||||||| ||||
Sbjct 9972 GGGACTAGGACTTTTACTTTGAAAAAATTAGAGTATTTAAAGTAGGCCTTTGCTTAAATA 10031
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
| ||| || |||||||||||||||| ||| ||||||||||| | |||||||||| |
Sbjct 10032 CGTTAGTATAGAATAATAGAATAGGATGTGTGGTTCTATTTTATTAGTTTCTAGGA-CTA 10090
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
||||||| || |||| ||||||| ||||| | |||||| |||| | | |||| ||||||
Sbjct 10091 CCGTAATAATTAATAGGGATAGTTAGGGGTATTAGTATTTAATTATTAGAGGTAAAATTC 10150
Query 181 TTGGATTTATT 191
|| ||||||||
Sbjct 10151 TTAGATTTATT 10161
>seq150
Length=5836
Score = 210 bits (232), Expect = 2e-52
Identities = 162/191 (85%), Gaps = 1/191 (1%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|| || |||||||||||||| |||||||||||| ||| |||| |||||||| || ||||
Sbjct 4170 GGGACTAGGACTTTTACTTTAAAAAAATTAGAGTGTTTAAAGTAGGCCTTTACTTAAATA 4111
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
| ||| ||| |||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 4110 CGTTAGCATAGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTAGTTTCTAGGA-CTA 4052
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
| ||||| || |||| ||||||| |||| | ||||||||||||| | |||||||||||
Sbjct 4051 CTGTAATAATTAATAGGGATAGTTAGGGGCATTAGTATTCAATTGTTAGAGGTGAAATTC 3992
Query 181 TTGGATTTATT 191
|| ||||||||
Sbjct 3991 TTAGATTTATT 3981
>seq144
Length=7156
Score = 179 bits (198), Expect = 4e-43
Identities = 155/191 (81%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|| || |||||||||||||| |||||||||||| ||| |||| |||||||| || ||||
Sbjct 1670 GGGACTAGGACTTTTACTTTAAAAAAATTAGAGTGTTTAAAGTAGGCCTTTACTTAAATA 1729
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
| ||| || ||||||||||||||||| | |||||||||||| | |||||||||| |
Sbjct 1730 CGTTAGTATAGAATAATAGAATAGGACATACGGTTCTATTTTATTAGTTTCTAGGA-CTA 1788
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
| |||| || |||| ||||||| ||||| | |||||| |||| | | |||| ||||||
Sbjct 1789 CTATAATAATTAATAGGGATAGTTAGGGGTATTAGTATTTAATTATTAGAGGTAAAATTC 1848
Query 181 TTGGATTTATT 191
|| ||||||||
Sbjct 1849 TTAGATTTATT 1859
>seq191
Length=1964
Score = 170 bits (188), Expect = 2e-40
Identities = 153/191 (80%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|| || |||||||||||||| |||||||||||| || |||| |||||||| || ||||
Sbjct 1714 GGGACTAGGACTTTTACTTTAAAAAAATTAGAGTATTTAAAGTAGGCCTTTACTTAAATA 1773
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
| ||| || ||||||||||||||||||| |||||||||| | |||||||||| |
Sbjct 1774 CGTTAGTATAGAATAATAGAATAGGACGTATAGTTCTATTTTATTAGTTTCTAGGA-CTA 1832
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
| |||| || |||| ||||||| ||||| | |||||| |||| | | |||| ||||||
Sbjct 1833 CTATAATAATTAATAAGGATAGTTAGGGGTATTAGTATTTAATTATTAGAGGTAAAATTC 1892
Query 181 TTGGATTTATT 191
|| ||||||||
Sbjct 1893 TTAGATTTATT 1903
>seq159
Length=3617
Score = 170 bits (188), Expect = 2e-40
Identities = 153/191 (80%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||| || ||||||||||| |||||||||||| ||| |||| |||||||| || ||||
Sbjct 1244 GGAACTAGAACTTTTACTTTAAAAAAATTAGAGTGTTTAAAGTAGGCCTTTACTTAAATA 1303
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
|||| || ||||||||||||||||||| |||||||||| | |||||||||| |
Sbjct 1304 TATTAGTATAGAATAATAGAATAGGACGTATAGTTCTATTTTATTAGTTTCTAGGA-CTA 1362
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
| |||| || |||| ||||||| |||| | |||||| |||| | | |||| ||||||
Sbjct 1363 CTATAATAATTAATAGGGATAGTTAAGGGTATTAGTATTTAATTATTAGAGGTAAAATTC 1422
Query 181 TTGGATTTATT 191
|| ||||||||
Sbjct 1423 TTAGATTTATT 1433
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511998740160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |