Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq139 288 1e-75 seq132 224 1e-56 seq150 210 2e-52 seq144 179 4e-43 seq191 170 2e-40 seq159 170 2e-40 >seq139 Length=9664 Score = 288 bits (318), Expect = 1e-75 Identities = 179/191 (94%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 8546 GGGACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 8605 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 | ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 8606 CGTTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG- 8664 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||| ||||||||| ||||||||||||||||| ||||||||||| Sbjct 8665 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 8724 Query 181 TTGGATTTATT 191 ||||||||||| Sbjct 8725 TTGGATTTATT 8735 >seq132 Length=15117 Score = 224 bits (248), Expect = 1e-56 Identities = 165/191 (86%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 || || |||||||||||||| |||||||||||| ||| ||||||||||||| || ||||| Sbjct 1667 GGGACTAGGACTTTTACTTTAAAAAAATTAGAGTGTTTAAAGCAGGCCTTTACTTGAATA 1726 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 | ||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1727 CGTTAGCATAGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG- 1785 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 | |||| || |||| ||||||| ||||| | |||||| |||||| | |||| |||||| Sbjct 1786 CTATAATAATTAATAGGGATAGTTGGGGGCATTAGTATTTAATTGTTAGAGGTAAAATTC 1845 Query 181 TTGGATTTATT 191 || |||||||| Sbjct 1846 TTAGATTTATT 1856 Score = 192 bits (212), Expect = 6e-47 Identities = 158/191 (83%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 || || ||||||||||||||||||||||||||| || |||| ||||||||||| |||| Sbjct 9972 GGGACTAGGACTTTTACTTTGAAAAAATTAGAGTATTTAAAGTAGGCCTTTGCTTAAATA 10031 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 | ||| || |||||||||||||||| ||| ||||||||||| | |||||||||| | Sbjct 10032 CGTTAGTATAGAATAATAGAATAGGATGTGTGGTTCTATTTTATTAGTTTCTAGGA-CTA 10090 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 ||||||| || |||| ||||||| ||||| | |||||| |||| | | |||| |||||| Sbjct 10091 CCGTAATAATTAATAGGGATAGTTAGGGGTATTAGTATTTAATTATTAGAGGTAAAATTC 10150 Query 181 TTGGATTTATT 191 || |||||||| Sbjct 10151 TTAGATTTATT 10161 >seq150 Length=5836 Score = 210 bits (232), Expect = 2e-52 Identities = 162/191 (85%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 || || |||||||||||||| |||||||||||| ||| |||| |||||||| || |||| Sbjct 4170 GGGACTAGGACTTTTACTTTAAAAAAATTAGAGTGTTTAAAGTAGGCCTTTACTTAAATA 4111 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 | ||| ||| |||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 4110 CGTTAGCATAGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTAGTTTCTAGGA-CTA 4052 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 | ||||| || |||| ||||||| |||| | ||||||||||||| | ||||||||||| Sbjct 4051 CTGTAATAATTAATAGGGATAGTTAGGGGCATTAGTATTCAATTGTTAGAGGTGAAATTC 3992 Query 181 TTGGATTTATT 191 || |||||||| Sbjct 3991 TTAGATTTATT 3981 >seq144 Length=7156 Score = 179 bits (198), Expect = 4e-43 Identities = 155/191 (81%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 || || |||||||||||||| |||||||||||| ||| |||| |||||||| || |||| Sbjct 1670 GGGACTAGGACTTTTACTTTAAAAAAATTAGAGTGTTTAAAGTAGGCCTTTACTTAAATA 1729 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 | ||| || ||||||||||||||||| | |||||||||||| | |||||||||| | Sbjct 1730 CGTTAGTATAGAATAATAGAATAGGACATACGGTTCTATTTTATTAGTTTCTAGGA-CTA 1788 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 | |||| || |||| ||||||| ||||| | |||||| |||| | | |||| |||||| Sbjct 1789 CTATAATAATTAATAGGGATAGTTAGGGGTATTAGTATTTAATTATTAGAGGTAAAATTC 1848 Query 181 TTGGATTTATT 191 || |||||||| Sbjct 1849 TTAGATTTATT 1859 >seq191 Length=1964 Score = 170 bits (188), Expect = 2e-40 Identities = 153/191 (80%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 || || |||||||||||||| |||||||||||| || |||| |||||||| || |||| Sbjct 1714 GGGACTAGGACTTTTACTTTAAAAAAATTAGAGTATTTAAAGTAGGCCTTTACTTAAATA 1773 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 | ||| || ||||||||||||||||||| |||||||||| | |||||||||| | Sbjct 1774 CGTTAGTATAGAATAATAGAATAGGACGTATAGTTCTATTTTATTAGTTTCTAGGA-CTA 1832 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 | |||| || |||| ||||||| ||||| | |||||| |||| | | |||| |||||| Sbjct 1833 CTATAATAATTAATAAGGATAGTTAGGGGTATTAGTATTTAATTATTAGAGGTAAAATTC 1892 Query 181 TTGGATTTATT 191 || |||||||| Sbjct 1893 TTAGATTTATT 1903 >seq159 Length=3617 Score = 170 bits (188), Expect = 2e-40 Identities = 153/191 (80%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||| || ||||||||||| |||||||||||| ||| |||| |||||||| || |||| Sbjct 1244 GGAACTAGAACTTTTACTTTAAAAAAATTAGAGTGTTTAAAGTAGGCCTTTACTTAAATA 1303 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 |||| || ||||||||||||||||||| |||||||||| | |||||||||| | Sbjct 1304 TATTAGTATAGAATAATAGAATAGGACGTATAGTTCTATTTTATTAGTTTCTAGGA-CTA 1362 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 | |||| || |||| ||||||| |||| | |||||| |||| | | |||| |||||| Sbjct 1363 CTATAATAATTAATAGGGATAGTTAAGGGTATTAGTATTTAATTATTAGAGGTAAAATTC 1422 Query 181 TTGGATTTATT 191 || |||||||| Sbjct 1423 TTAGATTTATT 1433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511998740160