Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq139 298 9e-79 seq187 286 6e-75 seq132 217 2e-54 seq226 205 2e-50 seq144 205 2e-50 seq172 104 4e-20 >seq139 Length=9664 Score = 298 bits (330), Expect = 9e-79 Identities = 237/279 (85%), Gaps = 8/279 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| | Sbjct 5333 GTACGAGAGGAACCGCGGT-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCATT 5390 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5391 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 5450 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179 ||||||||||||| | ||||||| ||||||||||||||||| ||| ||||| ||| Sbjct 5451 GAACGGGGTGATTTCCGCCTGCAC----CAGTCGGATACGAATAGGCCTTTGGCCCAGAA 5506 Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 ||||| ||||||||| || ||| |||| || ||| ||| |||| ||||| Sbjct 5507 CCTTACCAGGCCGGCGTTGGCAGTCTTATTGAAGTTAAGGCTGCT-AGCCGGCGTATTGC 5565 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||| || |||||||| | ||||||||||||||||| Sbjct 5566 AATTGTACAGTGCGCAGGATTGAATCCTTTGCAGACGAC 5604 >seq187 Length=2133 Score = 286 bits (316), Expect = 6e-75 Identities = 238/283 (84%), Gaps = 10/283 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 615 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 672 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| |||| |||||||||||||||||||||||||||| |||| Sbjct 673 GCCGCGACGCTACCATCTGCCGGATAATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 732 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTC-GGCCCCGA 178 ||||| |||||| | || |||| ||||||| ||||||||||||| |||| |||| | Sbjct 733 GAACGCGGTGATACCGCCCCGCACGTCGTAGTTGGATACGAATAGGCCTTCGGGCCATGG 792 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCC---GCGGAAGCGCGGGGCGCTCAGCTGGCGGA 235 |||| ||||||| ||| |||| | ||| | | || | | ||| ||| ||||||||| Sbjct 793 ACCTCAGCAGGCTGGCGACGGCC--CCCAGGGAGAAACCCCTGGGAGCT-GGCTGGCGGA 849 Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||| ||||| |||| ||||| |||||| |||||||||| Sbjct 850 TTGCAATGTCACCTCGCGCGGGGATGAATCCTCTGCAGACGAC 892 >seq132 Length=15117 Score = 217 bits (240), Expect = 2e-54 Identities = 219/279 (78%), Gaps = 8/279 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||||| || ||| ||||| |||||| |||||||||||| ||||| | Sbjct 14499 GTACGAGAGGAACCGCGGTTTT-AGA-TAATTAGTTTTTACGGCTGTCTGACTAGGCATT 14556 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||| || |||||| |||||| |||||||||| |||||| || | | Sbjct 14557 GCCGCGAAGCTACCATCTACTAGATTATAGCTGAATGCCTCTAAGTTAGAATCTATACTA 14616 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179 ||||||||||||| | ||| ||| |||||||||||||||||| ||| ||| ||| Sbjct 14617 GAACGGGGTGATTTCCGCCTACAC----TAGTCGGATACGAATAGGCCTTTAGCCTAGAA 14672 Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 ||||| |||||||| || ||| |||| || ||| |||| ||| |||| Sbjct 14673 CCTTACTAGGCCGGCGTTGGTAGTCTTATTGAAGTTAAGGCTGCT-AGCTAGCGTATTGT 14731 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||| || |||| ||| | ||||||||| ||||||| Sbjct 14732 AATTGTACAGTGCGTAGGATTGAATCCTTTGTAGACGAC 14770 Score = 205 bits (226), Expect = 2e-50 Identities = 216/279 (77%), Gaps = 8/279 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||||| || ||| ||||| |||||||||||| ||| || ||| | | Sbjct 6194 GTACGAGAGGAACCGCGGTTTT-AGA-TAATTAGTTTTTGCGGCTATCTAACTAGGTATT 6251 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||| |||| || |||||||||| ||||||||||||| |||||| || | | Sbjct 6252 GCCGCGAAGCTACTATCTACTAGATTATGGCTAAACGCCTCTAAGTTAGAATCTATACTA 6311 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179 ||||||||||||| | ||||||| |||| ||||||||||||| ||| ||| ||| Sbjct 6312 GAACGGGGTGATTTCCGCCTGCAC----TAGTTGGATACGAATAGGCCTTTAGCCTAGAA 6367 Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 ||||| |||||||| | ||| ||| || ||| ||| || | ||||| Sbjct 6368 CCTTACTAGGCCGGCGTTAGTAGTCTTATTAAAGTTAAGGCTGCT-AGCCGGTGTATTGC 6426 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||| | |||||||| |||||||||| |||||||| Sbjct 6427 AATTATATAGTGCGCAGGATTAAATCCTTTACAGACGAC 6465 >seq226 Length=1320 Score = 205 bits (226), Expect = 2e-50 Identities = 216/279 (77%), Gaps = 8/279 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| ||||||||| |||| || ||| ||||| |||||||||||| ||| || ||||| | Sbjct 783 GTATGAGAGGAACTGCGGTTTT-AGA-TAATTAGTTTTTGCGGCTATCTAACTAGGCATT 840 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||| |||| || |||||| ||| |||||||||||||||||||| |||| | Sbjct 841 GCCGCGAAGCTACTATCTACTAGATTATAGCTAAACGCCTCTAAGTCAGAATCTATGCTA 900 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179 ||||||||||||| | ||| ||| |||| ||||||||||||| ||| |||| ||| Sbjct 901 GAACGGGGTGATTTCCGCCTACAC----TAGTTGGATACGAATAGGCCTTTGGCCTAGAA 956 Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 ||||| |||| ||| | ||| ||| || || |||||||| ||||| Sbjct 957 CCTTACTAGGCTGGCGTTAGTAGTCTTATTAAAGTTAAGGCTACT-AGCTGGCGTATTGC 1015 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||| | |||| ||| ||||||||||||||||||| Sbjct 1016 AATTATATAGTGCGTAGGATTAAATCCTTTGCAGACGAC 1054 >seq144 Length=7156 Score = 205 bits (226), Expect = 2e-50 Identities = 216/279 (77%), Gaps = 8/279 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | || ||| |||||||||||||||||||||| || ||| | | Sbjct 6197 GTACGAGAGGAACTGTAGTTTT-AGA-TAATTGGTTTTTGCGGCTGTCTAACTAGGTATT 6254 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||| ||||||| |||||| ||| |||||||||||||||||||| |||| | Sbjct 6255 GCCGCGAAGCTACTATCTGCTAGATTATAGCTAAACGCCTCTAAGTCAGAATCTATGCTA 6314 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179 ||| ||||||||| | ||||||| |||||||||||||||||| ||| ||| ||| Sbjct 6315 GAATGGGGTGATTTCCGCCTGCAC----TAGTCGGATACGAATAGGCCTTTAGCCTAGAA 6370 Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 ||||| |||||||| || ||| ||| || ||| |||||| | ||| Sbjct 6371 CCTTACTAGGCCGGCGTTGGCAGTCTTATTAAAGTTAAGGCTGCT-AGCTGGTGTATTAT 6429 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||| || |||| ||| | ||||||||||||| ||| Sbjct 6430 AATTATACAGTGCGTAGGATTGAATCCTTTGCAGATGAC 6468 >seq172 Length=2810 Score = 104 bits (114), Expect = 4e-20 Identities = 124/165 (75%), Gaps = 5/165 (3%) Strand=Plus/Plus Query 27 ATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATT 86 |||||| |||||| ||| ||| || ||| | | |||||||||||| |||| || |||| Sbjct 2176 ATAATTAGTTTTTATAGCTATCTAACTAGGTATTACCGCGAAGCTACTATCTACTAGATT 2235 Query 87 ATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCCTGCACAT 146 || ||| ||||||||||||| |||||| || | |||| |||| ||| ||| || || Sbjct 2236 ATAGCTAAACGCCTCTAAGTTAGAATCTATACTAGAATAGGGTAATT-TCTACT---TAT 2291 Query 147 CGTAGTCGGATACGAATAGG-CTTCGGCCCCGAACCTTAGCAGGC 190 |||| |||| |||||| ||| ||| |||||||| |||| Sbjct 2292 ACTAGTTAGATATAAATAGGCCTTTAGCCTAGAACCTTACTAGGC 2336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819197984256