Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq139 829 0.0 seq150 628 7e-178 seq132 574 1e-161 seq144 538 1e-150 seq191 412 1e-112 >seq139 Length=9664 Score = 829 bits (918), Expect = 0.0 Identities = 487/504 (97%), Gaps = 1/504 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8334 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 8275 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8274 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 8215 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 8214 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 8155 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| || | ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 8154 AGCCAATACCTTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCGTCGCCGGCG 8095 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||||||||||| ||| ||||||| ||||||||||||| ||||||||||||||||||| Sbjct 8094 CAAGGCCATGCGATCCGTAAAGTTATCATGAATCACCAAGAAGCCCCGAAGGGCGTTGGT 8035 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||| Sbjct 8034 TTTTTATCTAATAAATACACCCCTCCCGAAGTTGGGGTTTTCAGCATGTATTAGCTCTAG 7975 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 7974 AATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 7915 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct 7914 GCCATTCGCAGTTTCACGGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 7856 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 7855 AGACAAGCATATGACTACTGGCAG 7832 >seq150 Length=5836 Score = 628 bits (696), Expect = 7e-178 Identities = 442/503 (88%), Gaps = 1/503 (0%) Strand=Plus/Plus Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 ||||||||| ||||| |||||||||||||||||| ||| |||||||||| |||||||||| Sbjct 4383 TACTCATTCTAATTATAAGACCCAAAAGAGCCCTATATTAGTATTTATTATCACTACCTC 4442 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 ||| | || ||||| |||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 4443 CCCATATCAGGATTAGGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTAGTAGCCGTTT 4502 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 || ||||||||||||| ||||||||||||||||||| ||||||||| | || || ||| Sbjct 4503 CTTAGGCTCCCTCTCCAGAATCGAACCCTAATTCCCTATTACCCGTTAAAACTATAGTAA 4562 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 |||| || | |||||| |||||| ||||||||||||||| ||| |||| | |||||| Sbjct 4563 GCCAATACCTTACCATTAAAAGTTAATAGGGCAGAAATTTAAATAAACCGTTGCCGGCGT 4622 Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301 |||||||||| || ||| ||||||| || ||| || ||| |||||| ||||||||| ||| Sbjct 4623 AAGGCCATGCAATCCGTAAAGTTATCATAAATTACTAAGAAGCCCCAAAGGGCGTTAGTT 4682 Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361 ||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||| Sbjct 4683 TTTTATCTAATAAATACACCCCTCCCGAAGTTAGGGTTTTTAGCATATATTAGCTCTAGA 4742 Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421 ||||| ||||||||| | ||||||||||||||| ||||||||||||||| ||||||| || Sbjct 4743 ATTACTACGGTTATCTAAGTAGTAAGGTACTATTAAATAAACGATAACTAATTTAATAAG 4802 Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481 | |||||||||||||| ||||| ||| ||||||||||||||| ||| ||||||||||| | Sbjct 4803 CTATTCGCAGTTTCACGGTATA-ATTACTTATACTTAGACATACATAGCTTAATCTTTAA 4861 Query 482 GACAAGCATATGACTACTGGCAG 504 ||||||||||| |||||| |||| Sbjct 4862 GACAAGCATATAACTACTAGCAG 4884 >seq132 Length=15117 Score = 574 bits (636), Expect = 1e-161 Identities = 430/503 (85%), Gaps = 1/503 (0%) Strand=Plus/Minus Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 ||||||||| ||||| |||||| ||||||||||| ||| |||||||||| |||||||||| Sbjct 1454 TACTCATTCTAATTATAAGACCTAAAAGAGCCCTATATTAGTATTTATTATCACTACCTC 1395 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 ||| ||| ||||| |||||||| |||||||||| |||||||| ||| | |||||||||| Sbjct 1394 CCCATGTTAGGATTAGGTAATTTACGCGCCTGCTACCTTCCTTAGATATAGTAGCCGTTT 1335 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 || |||||||||||| |||||||||||||||||||||||||| || | || || ||| Sbjct 1334 CTTAGGCTCCCTCTCTAGAATCGAACCCTAATTCCCCGTTACCTATTAAAACTATAGTAA 1275 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || | || | ||| ||| |||||| ||||||||||||||| ||| |||| ||||| || Sbjct 1274 GCTAATACCTTACTATCAAAAGTTAATAGGGCAGAAATTTAAATAAACCGTCGCCAGCGT 1215 Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301 ||||| || || || ||||||| || |||||| ||| ||||| ||||||||| ||| Sbjct 1214 AAGGCTATATAATCTGTAAAGTTATCATAAATCACTAAGAAGCCCTAAAGGGCGTTAGTT 1155 Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361 ||||||||||||||||||||||| | |||| ||||||| ||||||||||||||||||| Sbjct 1154 TTTTATCTAATAAATACACCCCTCCTAAAGTTAGGGTTTTCAGCATGTATTAGCTCTAGA 1095 Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421 ||||| ||||||||| | ||||||||||||||| ||||||||||||||| ||||||| || Sbjct 1094 ATTACTACGGTTATCTAAGTAGTAAGGTACTATTAAATAAACGATAACTAATTTAATAAG 1035 Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481 | |||||||||||||| ||||| ||| |||||||||||| |||||| ||||||||||| | Sbjct 1034 CTATTCGCAGTTTCACGGTATA-ATTACTTATACTTAGATATGCATAGCTTAATCTTTAA 976 Query 482 GACAAGCATATGACTACTGGCAG 504 ||||||||||| |||||| |||| Sbjct 975 GACAAGCATATAACTACTAGCAG 953 Score = 565 bits (626), Expect = 7e-159 Identities = 425/498 (85%), Gaps = 1/498 (0%) Strand=Plus/Minus Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||| |||| |||||||||||| ||||||||||| ||| |||||||||| |||||||||| Sbjct 9759 TACTTATTCTAATTACAAGACCTAAAAGAGCCCTATATTAGTATTTATTATCACTACCTC 9700 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 ||||| | ||||| |||||||| ||||| ||||||||||| ||||| |||||||||| Sbjct 9699 CCCGTATTAGGATTAGGTAATTTATACGCCTACTGCCTTCCTTAGATGTAGTAGCCGTTT 9640 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 || |||||||||||| |||| |||||||||||||| ||||||||| | || || ||| Sbjct 9639 CTTAGGCTCCCTCTCTAGAATTAAACCCTAATTCCCCATTACCCGTTAAAACTATAGTAA 9580 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || | || | ||| ||| |||||| |||||| |||||||| ||| ||||||| ||||| Sbjct 9579 GCTAATACCTTACTATCAAAAGTTAATAGGGTAGAAATTTAAATAAACCATCACCGGCGT 9520 Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301 ||||||||||||| | ||||||| || ||| || ||| ||||| ||||||||||||| Sbjct 9519 AAGGCCATGCGATCTATAAAGTTATCATAAATTACTAAGAAGCCCTAAAGGGCGTTGGTT 9460 Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361 ||||||||||||||||||||||| | |||| |||||||||| || ||||||||||||| Sbjct 9459 TTTTATCTAATAAATACACCCCTCCTAAAGTTAGGGTTTTTAGTATATATTAGCTCTAGA 9400 Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421 ||||||||||||||| | ||||||||||||||| ||||||||||||||| ||||||| || Sbjct 9399 ATTACCACGGTTATCTAAGTAGTAAGGTACTATTAAATAAACGATAACTAATTTAATAAG 9340 Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481 | ||||| |||||||| ||||| ||| |||||||||||| |||||| ||||||||||| | Sbjct 9339 CTATTCGTAGTTTCACGGTATA-ATTACTTATACTTAGATATGCATAGCTTAATCTTTAA 9281 Query 482 GACAAGCATATGACTACT 499 || |||||||| |||||| Sbjct 9280 GATAAGCATATAACTACT 9263 >seq144 Length=7156 Score = 538 bits (596), Expect = 1e-150 Identities = 422/503 (84%), Gaps = 1/503 (0%) Strand=Plus/Minus Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||| |||| ||||| |||||| ||||||||||||||| |||||||||| | |||||||| Sbjct 1457 TACTTATTCTAATTATAAGACCTAAAAGAGCCCTGTATTAGTATTTATTATTACTACCTC 1398 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 || ||| ||||| |||||||| ||||||| ||||||||||| ||||| ||||| |||| Sbjct 1397 CCTATGTTAGGATTAGGTAATTTACGCGCCTACTGCCTTCCTTAGATGTAGTAGCTGTTT 1338 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 || |||||||||||||||||| ||||||||||||||||||||||||||| || || ||| Sbjct 1337 CTTAGGCTCCCTCTCCGGAATTGAACCCTAATTCCCCGTTACCCGTTGAAACTATAGTAA 1278 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || | || | ||| || ||||||| |||||| |||||||| ||| ||| || | ||| Sbjct 1277 GCTAATACCTTACTATTGAAAGTTAATAGGGTAGAAATTTAAATAAACTATTACTGGCGT 1218 Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301 ||||| || ||| ||| |||||||||| |||||| ||| ||||| ||||||||| ||| Sbjct 1217 AAGGCTATATGATCCGTAAAGTTATTATAAATCACTAAGAAGCCCTAAAGGGCGTTAGTT 1158 Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361 |||||||||||||||| |||||| | |||| |||||||||| |||||||||||||||| Sbjct 1157 TTTTATCTAATAAATATACCCCTCCTAAAGTTAGGGTTTTTAGTATGTATTAGCTCTAGA 1098 Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421 ||||| | |||||| | ||||||||||||||| ||||||| |||||| ||||||| || Sbjct 1097 ATTACTATAGTTATCTAAGTAGTAAGGTACTATTAAATAAATAATAACTAATTTAATAAG 1038 Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481 | ||||||||||| || ||||| ||| |||||||||||| || || ||||||||||| | Sbjct 1037 CTATTCGCAGTTTTACGGTATA-ATTACTTATACTTAGATATATATAGCTTAATCTTTAA 979 Query 482 GACAAGCATATGACTACTGGCAG 504 || ||| |||| |||||| |||| Sbjct 978 GATAAGTATATAACTACTAGCAG 956 >seq191 Length=1964 Score = 412 bits (456), Expect = 1e-112 Identities = 391/498 (79%), Gaps = 1/498 (0%) Strand=Plus/Minus Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||| |||| ||||| |||||| ||||||||||| ||| |||||||||| | |||||||| Sbjct 1501 TACTTATTCTAATTATAAGACCTAAAAGAGCCCTATATTAGTATTTATTATTACTACCTC 1442 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 || | | ||||| |||||||| ||||||| || |||||||| ||| | |||| ||| Sbjct 1441 CCTATATTAGGATTAGGTAATTTACGCGCCTACTACCTTCCTTAGATATAATAGCTATTT 1382 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 || |||||||||||| |||| ||||||||||||| ||||| || | || || ||| Sbjct 1381 CTTAGGCTCCCTCTCTAGAATTAAACCCTAATTCCCTATTACCTATTAAAACTATAGTAA 1322 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || | || | ||| || |||||| |||||| |||||||| ||| ||| || | || Sbjct 1321 GCTAATACCTTACTATTAAAAGTTAATAGGGTAGAAATTTAAATAAACTATTACTAGCGT 1262 Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301 ||||| || || | |||||||||| ||| || ||| ||||| ||||| || ||| Sbjct 1261 AAGGCTATATAATCTATAAAGTTATTATAAATTACTAAGAAGCCCTAAAGGGTATTAGTT 1202 Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361 |||||||||||||||| |||||| | |||| |||||||||| || ||||||||||||| Sbjct 1201 TTTTATCTAATAAATATACCCCTCCTAAAGTTAGGGTTTTTAGTATATATTAGCTCTAGA 1142 Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421 ||||| | |||||| | ||||||||||||||| ||||||| |||||| ||||||| || Sbjct 1141 ATTACTATAGTTATCTAAGTAGTAAGGTACTATTAAATAAATAATAACTAATTTAATAAG 1082 Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481 | ||| ||||| | ||||| ||| |||||||||||| || || ||||||||||| | Sbjct 1081 CTATTTATAGTTTTATAGTATA-ATTACTTATACTTAGATATATATAGCTTAATCTTTAA 1023 Query 482 GACAAGCATATGACTACT 499 || ||| |||| |||||| Sbjct 1022 GATAAGTATATAACTACT 1005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510396163584