Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq233 96.9 2e-18
seq90 73.4 2e-11
>seq233
Length=126900
Score = 96.9 bits (106), Expect = 2e-18
Identities = 76/86 (88%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 73738 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 73682
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| ||||||| |||
Sbjct 73681 GGCAGGGACGTAAT-CAACGCATGCT 73657
>seq90
Length=940264
Score = 73.4 bits (80), Expect = 2e-11
Identities = 71/86 (83%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||| | || ||||||| ||| ||| ||
Sbjct 468034 TCCGAATGC-CTCACTGAGCCATT-CAGTCGGTAGCA-GCCTCGGGCGGTGTGCACACAG 467978
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| ||||||| |||
Sbjct 467977 GGCAGGGACGTAAT-CAACGCATGCT 467953
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300799247060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |