Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201 7-04-03] 267 sequences; 47,410,550 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq173 693 0.0 seq153 693 0.0 seq227 181 3e-43 seq13 132 2e-28 >seq173 Length=618 Score = 693 bits (768), Expect = 0.0 Identities = 415/435 (95%), Gaps = 3/435 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 187 CTTTTGCTCTACTGGAGATTTCTGTTCTCCATGAGCTCCCCTTAGGACACCTGCGTTATG 246 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 247 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 306 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 307 GGCCCGCGAGGGACCTTAACGCCAGAATATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 366 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||||||||||||||||||||||||||||| |||||||| |||||||| || Sbjct 367 TTAAGTAAAAAAACGATAAGGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 423 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||| | | ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 424 TTCTACACCCCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 483 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 484 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 543 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 544 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 603 Query 427 TGGCTACCTTAAGAG 441 ||||||||||||||| Sbjct 604 TGGCTACCTTAAGAG 618 >seq153 Length=1413 Score = 693 bits (768), Expect = 0.0 Identities = 415/435 (95%), Gaps = 3/435 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 35 CTTTTGCTCTACTGGAGATTTCTGTTCTCCATGAGCTCCCCTTAGGACACCTGCGTTATG 94 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 95 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 154 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 155 GGCCCGCGAGGGACCTTAACGCCAGAATATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 214 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||||||||||||||||||||||||||||| |||||||| |||||||| || Sbjct 215 TTAAGTAAAAAAACGATAAGGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 271 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||| | | ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 272 TTCTACACCCCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 331 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 332 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 391 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 392 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 451 Query 427 TGGCTACCTTAAGAG 441 ||||||||||||||| Sbjct 452 TGGCTACCTTAAGAG 466 >seq227 Length=146938 Score = 181 bits (200), Expect = 3e-43 Identities = 100/100 (100%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 342 CTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGC 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGC 60 Query 402 GTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAG 441 |||||||||||||||||||||||||||||||||||||||| Sbjct 61 GTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAG 100 >seq13 Length=1140975 Score = 132 bits (146), Expect = 2e-28 Identities = 78/81 (96%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 81646 CTTTTGCTCTACTGGAGATTTCTGTTCTCCATGAGCTCCCCTTAGGACACCTGCGTTATG 81587 Query 67 GTTTAACAGATGTGCCGCCCC 87 ||||||||||||||||||||| Sbjct 81586 GTTTAACAGATGTGCCGCCCC 81566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635195634016