Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq13 311 1e-82
>seq13
Length=1140975
Score = 311 bits (344), Expect = 1e-82
Identities = 239/278 (86%), Gaps = 4/278 (1%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||||| |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 81970 GTACGAGAGGAACCGCGGT-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 82027
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 82028 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 82087
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||| ||| |||||||||| |||| ||||| |||||||||||||||||||||||| ||
Sbjct 82088 GAAAGGGACGATTCTCTCCAGCACGTCGTACGAGGATACGAATAGGCTTCGGCCCCGGAC 82147
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCA 240
||||||||| | ||||| | |||| ||||| ||||| | | || ||||| |||
Sbjct 82148 CTTAGCAGGGC-GCAACTCCCTCCCCGTGGAAG-TCGGGGTGGGTAAGTGCCGGATAGCA 82205
Query 241 ATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||| || |||| ||||| || ||||||||||||||
Sbjct 82206 ATTTGACAGCGCGCTGGGATGAAACCTTTGCAGACGAC 82243
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819197881088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |