Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq183 122 3e-22
seq217 89.7 2e-12
>seq183
Length=685938
Score = 122 bits (134), Expect = 3e-22
Identities = 148/201 (74%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 364379 CCTCGCAAGGCTCCCACCTTGGAGGCTACAATCTCCATGAGCTTACCAATAGTCATACGA 364438
|| |||| ||| || || |||||| | | ||| || | | | || ||||| ||
Sbjct 169397 CCGCGCAGGGCACCGACTTTGGAGAGGAGACACTCGATCAAATGGGCTATGGTCATGCGG 169456
Query 364439 GAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCAGCGGTAAAGGGC 364498
|||||||||| | |||| |||||||||||||| || || ||||| || || || ||||||
Sbjct 169457 GAGGGAATGGCGTGAGGATTGATGATGATGTCGGGAACGATGCCATCGGCTGTGAAGGGC 169516
Query 364499 ATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCATAGCGAGAAGCAAAC 364558
|| ||||| | || | ||| ||||||||| || || || | | ||| |||||||||
Sbjct 169517 ATGTCTTCTTGGCGATAGGTGATACCAATGGTACCTTTCTGACCGTGGCGGGAAGCAAAC 169576
Query 364559 TTGTCGCCAATGACTGGGTCA 364579
|||||||| || ||||| ||
Sbjct 169577 TTGTCGCCGAT--CTGGGGCA 169595
>seq217
Length=1262075
Score = 89.7 bits (98), Expect = 2e-12
Identities = 109/146 (75%), Gaps = 2/146 (1%)
Strand=Plus/Minus
Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484
|||| ||||| || ||||| || | | | ||||||||||||||||| || || |||||||
Sbjct 961196 CAATTGTCATGCGGGAGGGGATAGCGTGGGGGTTGATGATGATGTCGGGGACGATGCCGT 961137
Query 364485 CAGCGGTAAAGGGCATATCTTC-GGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543
| || || || ||||| ||||| || || | | | | ||| || || || || || |
Sbjct 961136 CGGCTGTGAAAGGCATGTCTTCTTGGCGGTA-GGTAATACCGATTGTACCTTTCTGACCG 961078
Query 364544 TAGCGAGAAGCAAACTTGTCGCCAAT 364569
| ||| || || |||||||| |||||
Sbjct 961077 TGGCGGGAGGCGAACTTGTCACCAAT 961052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884879951921431
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |