Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045. 2_202017-04-03] 232 sequences; 44,765,267 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq222 515 2e-143 >seq222 Length=400 Score = 515 bits (570), Expect = 2e-143 Identities = 363/406 (89%), Gaps = 8/406 (2%) Strand=Plus/Minus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 400 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 341 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 340 CTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 281 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 280 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 221 Query 214 TGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT-CAGGCCAGCA 272 ||| ||| | || || |||| | |||||||| ||||| | ||| | |||||||||| Sbjct 220 TGCTCGC-GGTGTTCCGCCGGTCATACGGCCGGTTCACTC-GCCGCGTTGCAGGCCAGCA 163 Query 273 TCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAG 332 || || |||| ||||||| ||| | | |||||||| || ||| |||||| ||||||||| Sbjct 162 TCGTCTGGGGCCGTCGGAT-AAGACTCTGGGAATGTAGCTCCCCTCGGGGAGTGTTATAG 104 Query 333 CCCGGGGTGGAATGCGGCCCG-CCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCG 391 ||| ||| ||||| | || || || | |||||||||||| ||||||||||||||||| Sbjct 103 CCCACTGTG--ATGCGACGCGTCCCGGGC-GAGGTCCGCGCTTCGGCTAGGATGCTGGCG 47 Query 392 TAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTA 437 ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 46 TAATGGTTGTAAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079995023600