Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq222 515 2e-143
>seq222
Length=400
Score = 515 bits (570), Expect = 2e-143
Identities = 363/406 (89%), Gaps = 8/406 (2%)
Strand=Plus/Minus
Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 400 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 341
Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 340 CTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 281
Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 280 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 221
Query 214 TGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT-CAGGCCAGCA 272
||| ||| | || || |||| | |||||||| ||||| | ||| | ||||||||||
Sbjct 220 TGCTCGC-GGTGTTCCGCCGGTCATACGGCCGGTTCACTC-GCCGCGTTGCAGGCCAGCA 163
Query 273 TCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAG 332
|| || |||| ||||||| ||| | | |||||||| || ||| |||||| |||||||||
Sbjct 162 TCGTCTGGGGCCGTCGGAT-AAGACTCTGGGAATGTAGCTCCCCTCGGGGAGTGTTATAG 104
Query 333 CCCGGGGTGGAATGCGGCCCG-CCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCG 391
||| ||| ||||| | || || || | |||||||||||| |||||||||||||||||
Sbjct 103 CCCACTGTG--ATGCGACGCGTCCCGGGC-GAGGTCCGCGCTTCGGCTAGGATGCTGGCG 47
Query 392 TAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTA 437
||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 46 TAATGGTTGTAAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079995023600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |