Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq218 100 7e-19
>seq218
Length=581
Score = 100 bits (110), Expect = 7e-19
Identities = 192/281 (68%), Gaps = 9/281 (3%)
Strand=Plus/Plus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| ||||| ||| ||||||||||||| | | ||||||||
Sbjct 269 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGT 328
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||||||| ||||| |||| | | | | ||| | | || || ||| |||||||||||||
Sbjct 329 ATCGTTAAATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGA 388
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC-------TTCGCGTT 179
|| | || | || ||||||| || | |||| ||| |||| | | || ||
Sbjct 389 CCCTCATCGGTAAGGCCGCCATTGATTGGGGGTTCCTTCAAAACCTAGCTTATTTTAGTC 448
Query 180 AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT 239
| |||| ||| |||||| || || |||||| |||||| | |||| | | |
Sbjct 449 AACTAAGAAAATCCGTTAACCAGCCAACATTGGGCAGAAATCACACTCAATACTTTGATT 508
Query 240 T-TCGTGTT-TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
| || | || |||| |||||| |||||| | ||||||||||
Sbjct 509 TGTCATCTTATGCAAAGTGCTTTGTTTTAATTAAACAGTCG 549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260797074944
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |