Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045. 2_202017-04-03] 232 sequences; 44,765,267 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq218 100 7e-19 >seq218 Length=581 Score = 100 bits (110), Expect = 7e-19 Identities = 192/281 (68%), Gaps = 9/281 (3%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || |||| |||| ||||| ||| ||||||||||||| | | |||||||| Sbjct 269 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGT 328 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| ||||| |||| | | | | ||| | | || || ||| ||||||||||||| Sbjct 329 ATCGTTAAATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGA 388 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC-------TTCGCGTT 179 || | || | || ||||||| || | |||| ||| |||| | | || || Sbjct 389 CCCTCATCGGTAAGGCCGCCATTGATTGGGGGTTCCTTCAAAACCTAGCTTATTTTAGTC 448 Query 180 AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT 239 | |||| ||| |||||| || || |||||| |||||| | |||| | | | Sbjct 449 AACTAAGAAAATCCGTTAACCAGCCAACATTGGGCAGAAATCACACTCAATACTTTGATT 508 Query 240 T-TCGTGTT-TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | || | || |||| |||||| |||||| | |||||||||| Sbjct 509 TGTCATCTTATGCAAAGTGCTTTGTTTTAATTAAACAGTCG 549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260797074944