Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq5 95.1 7e-18
>seq5
Length=1792981
Score = 95.1 bits (104), Expect = 7e-18
Identities = 69/76 (91%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||| ||||||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 870285 CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 870228
Query 109 TAATACAACGCAAGCT 124
|||| ||||||| |||
Sbjct 870227 TAAT-CAACGCATGCT 870213
Score = 73.4 bits (80), Expect = 2e-11
Identities = 71/86 (83%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||| | || ||||||| ||| ||| ||
Sbjct 861491 TCCGAATGC-CTCACTGAGCCATT-CAGTCGGTAGCA-GCCTCGGGCGGTGTGCACACAG 861435
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| ||||||| |||
Sbjct 861434 GGCAGGGACGTAAT-CAACGCATGCT 861410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300799345760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |