Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045. 2_202017-04-03] 232 sequences; 44,765,267 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq5 174 3e-41 >seq5 Length=1792981 Score = 174 bits (192), Expect = 3e-41 Identities = 104/109 (95%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 220 TAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCT 279 || || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 870136 TACACGCCGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCT 870195 Query 280 AGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct 870196 AGTAAGCGCATGTCATCAGCATGCGTTGATTACGTCCCTGCCCTTTGTA 870244 Score = 120 bits (132), Expect = 6e-25 Identities = 89/104 (86%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 224 CTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTA 283 |||||| || |||||||| ||||| |||| |||||||||| | ||||| | ||| |||| Sbjct 861337 CTCTGTTGTACTGGGGATTGAGCAATGCAGTTATTGCTCTCAATCGAGGGACGCCCAGTA 861396 Query 284 AGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGT 327 ||||| || |||||||| |||||||||||||||||||||| ||| Sbjct 861397 AGCGCATGGCATCAGCATGCGTTGATTACGTCCCTGCCCTGTGT 861440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947197802496