Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045. 2_202017-04-03] 232 sequences; 44,765,267 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1 199 3e-46 >seq1 Length=3303888 Score = 199 bits (220), Expect = 3e-46 Identities = 377/549 (69%), Gaps = 17/549 (3%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | |||||| | ||| || Sbjct 493990 ATATGGCAGATGTACAAGAAGGCAGAGGCATCATTCTGGACAGCAGAGGAGATTGATCTG 494049 Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 || ||||| || | |||||| | |||| | | || | || | | |||||| Sbjct 494050 TCGAAAGATCTGCACGACTGGAACAAGCGTCTCAATGAT-GACGAGCGATTCTTCATTTC 494108 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 ||||||| | || ||||| ||||| || ||||| |||||||| ||||| | | || || Sbjct 494109 ACATGTGCTTGCCTTCTTCGCCGCATCAGACGGCATCGTCAACGAGAACCTGGTCGAGCG 494168 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| ||||||||| | | ||||| || || ||||||||||||||||| || Sbjct 494169 ATTCAGTGGCGAGGTGCAAATCCCTGAGGCTCGCTGCTTCTACGGCTTCCAGATCATGAT 494228 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 ||||||| ||||||| |||| ||| | |||||||| || |||||||| || | Sbjct 494229 GGAGAATATCCACTCCGAGACCTACTCACTACTCATCGACACCTACATCAGCGAACCTCG 494288 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGC----GGAAAG 61438 |||| | | || || |||||||| | || || ||| | | ||| | Sbjct 494289 CCAACGCACATACCTCTTTAACGCCATCGACAACATCCC----GTGCATCCGCAAGAAGG 494344 Query 61439 CGGATTGGGCCTTCAATTGGATCACCAGTACAACG--GCTACATTTGGTGAACGATTGCT 61496 | | ||||| | || ||||||| | || ||| | || || || || | | Sbjct 494345 CCAACTGGGCACTAAAGTGGATCAGC--GACGACGCATCGACCTTCGGCTGCCGTCTCAT 494402 Query 61497 GGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTT 61556 || ||||| | |||||||| | || ||| ||| ||||| ||||| ||||| ||| | Sbjct 494403 TGCCTTTGCAGCTGTCGAGGGCATTTTCTTCTCTGGTTCGTTCGCCGCTATCTTCTGGCT 494462 Query 61557 GAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616 ||||| || || || |||||||| || |||||| ||| ||| | || || || ||||| Sbjct 494463 CAAGAAGCGCGGGCTGATGCCCGGCCTCACCTTCTCCAACGAGCTCATTTCCCGTGACGA 494522 Query 61617 GGGCATGCA 61625 ||||||||| Sbjct 494523 GGGCATGCA 494531 Score = 187 bits (206), Expect = 2e-42 Identities = 375/548 (68%), Gaps = 15/548 (3%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | |||||| |||| || Sbjct 528357 ATATGGCAGATGTACAAGAAGGCAGAGGCATCATTCTGGACAGCAGAGGAGATCGACCTG 528416 Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 || || || || | |||||| | |||| | | ||| | || | | |||||| Sbjct 528417 TCGAAGGATCTGCACGACTGGAACAAGCGTCTCAACGAT-GACGAGCGATTCTTCATTTC 528475 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 ||||||| | || ||||| ||||| || ||||| || ||||| ||||| | | || || Sbjct 528476 ACATGTGCTTGCCTTCTTCGCCGCATCAGACGGCATTGTCAACGAGAACCTGGTCGAGCG 528535 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| ||||| ||| | | || || || || ||||||||||||||||| || Sbjct 528536 CTTCAGTGGTGAGGTCCAAATACCCGACGCTCGCTGCTTCTACGGCTTCCAGATCATGAT 528595 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| |||| ||| | |||||||| || |||||||| || | Sbjct 528596 GGAGAACATCCACTCCGAGACCTACTCACTACTCATCGACACCTACATCAGTGAACCTCG 528655 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG---GAAAGC 61439 |||| | | ||||| |||||||| | || || | | | || ||| || Sbjct 528656 CCAACGCACATACCTCTTCAACGCCATCGACAACATCCC--CTG-CATCCGCAAGAAGGC 528712 Query 61440 GGATTGGGCCTTCAATTGGATCACCAGTACAA--CGGCTACATTTGGTGAACGATTGCTG 61497 ||||||| |||| ||||||| | || | | | || || || || | | Sbjct 528713 CAATTGGGCACTCAAGTGGATCAGC--GACGATGCATCGACCTTCGGCTGCCGTCTCATC 528770 Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || || || | ||||||||| | || ||| ||| || || ||||| ||||| ||| || Sbjct 528771 GCTTTCGCAGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCGCCATCTTCTGGCTG 528830 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| || || || |||||||| || |||||| ||| ||| | || || || |||||| Sbjct 528831 AAGAAGCGCGGGCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAG 528890 Query 61618 GGCATGCA 61625 |||||||| Sbjct 528891 GGCATGCA 528898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566875876480