Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq1 199 3e-46
>seq1
Length=3303888
Score = 199 bits (220), Expect = 3e-46
Identities = 377/549 (69%), Gaps = 17/549 (3%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || || |||||||| | |||||| | ||| ||
Sbjct 493990 ATATGGCAGATGTACAAGAAGGCAGAGGCATCATTCTGGACAGCAGAGGAGATTGATCTG 494049
Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202
|| ||||| || | |||||| | |||| | | || | || | | ||||||
Sbjct 494050 TCGAAAGATCTGCACGACTGGAACAAGCGTCTCAATGAT-GACGAGCGATTCTTCATTTC 494108
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
||||||| | || ||||| ||||| || ||||| |||||||| ||||| | | || ||
Sbjct 494109 ACATGTGCTTGCCTTCTTCGCCGCATCAGACGGCATCGTCAACGAGAACCTGGTCGAGCG 494168
Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322
||| ||||||||| | | ||||| || || ||||||||||||||||| ||
Sbjct 494169 ATTCAGTGGCGAGGTGCAAATCCCTGAGGCTCGCTGCTTCTACGGCTTCCAGATCATGAT 494228
Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382
||||||| ||||||| |||| ||| | |||||||| || |||||||| || |
Sbjct 494229 GGAGAATATCCACTCCGAGACCTACTCACTACTCATCGACACCTACATCAGCGAACCTCG 494288
Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGC----GGAAAG 61438
|||| | | || || |||||||| | || || ||| | | ||| |
Sbjct 494289 CCAACGCACATACCTCTTTAACGCCATCGACAACATCCC----GTGCATCCGCAAGAAGG 494344
Query 61439 CGGATTGGGCCTTCAATTGGATCACCAGTACAACG--GCTACATTTGGTGAACGATTGCT 61496
| | ||||| | || ||||||| | || ||| | || || || || | |
Sbjct 494345 CCAACTGGGCACTAAAGTGGATCAGC--GACGACGCATCGACCTTCGGCTGCCGTCTCAT 494402
Query 61497 GGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTT 61556
|| ||||| | |||||||| | || ||| ||| ||||| ||||| ||||| ||| |
Sbjct 494403 TGCCTTTGCAGCTGTCGAGGGCATTTTCTTCTCTGGTTCGTTCGCCGCTATCTTCTGGCT 494462
Query 61557 GAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616
||||| || || || |||||||| || |||||| ||| ||| | || || || |||||
Sbjct 494463 CAAGAAGCGCGGGCTGATGCCCGGCCTCACCTTCTCCAACGAGCTCATTTCCCGTGACGA 494522
Query 61617 GGGCATGCA 61625
|||||||||
Sbjct 494523 GGGCATGCA 494531
Score = 187 bits (206), Expect = 2e-42
Identities = 375/548 (68%), Gaps = 15/548 (3%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || || |||||||| | |||||| |||| ||
Sbjct 528357 ATATGGCAGATGTACAAGAAGGCAGAGGCATCATTCTGGACAGCAGAGGAGATCGACCTG 528416
Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202
|| || || || | |||||| | |||| | | ||| | || | | ||||||
Sbjct 528417 TCGAAGGATCTGCACGACTGGAACAAGCGTCTCAACGAT-GACGAGCGATTCTTCATTTC 528475
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
||||||| | || ||||| ||||| || ||||| || ||||| ||||| | | || ||
Sbjct 528476 ACATGTGCTTGCCTTCTTCGCCGCATCAGACGGCATTGTCAACGAGAACCTGGTCGAGCG 528535
Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322
||| ||||| ||| | | || || || || ||||||||||||||||| ||
Sbjct 528536 CTTCAGTGGTGAGGTCCAAATACCCGACGCTCGCTGCTTCTACGGCTTCCAGATCATGAT 528595
Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382
|||||| ||||||| |||| ||| | |||||||| || |||||||| || |
Sbjct 528596 GGAGAACATCCACTCCGAGACCTACTCACTACTCATCGACACCTACATCAGTGAACCTCG 528655
Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG---GAAAGC 61439
|||| | | ||||| |||||||| | || || | | | || ||| ||
Sbjct 528656 CCAACGCACATACCTCTTCAACGCCATCGACAACATCCC--CTG-CATCCGCAAGAAGGC 528712
Query 61440 GGATTGGGCCTTCAATTGGATCACCAGTACAA--CGGCTACATTTGGTGAACGATTGCTG 61497
||||||| |||| ||||||| | || | | | || || || || | |
Sbjct 528713 CAATTGGGCACTCAAGTGGATCAGC--GACGATGCATCGACCTTCGGCTGCCGTCTCATC 528770
Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557
|| || || | ||||||||| | || ||| ||| || || ||||| ||||| ||| ||
Sbjct 528771 GCTTTCGCAGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCGCCATCTTCTGGCTG 528830
Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617
||||| || || || |||||||| || |||||| ||| ||| | || || || ||||||
Sbjct 528831 AAGAAGCGCGGGCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAG 528890
Query 61618 GGCATGCA 61625
||||||||
Sbjct 528891 GGCATGCA 528898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397566875876480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |