Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercivora_20[genbank_20GCA_5F001662465.1_202016-06-08]
26 sequences; 25,862,907 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq4 98.7 4e-15
>seq4
Length=2521912
Score = 98.7 bits (108), Expect = 4e-15
Identities = 111/146 (76%), Gaps = 2/146 (1%)
Strand=Plus/Minus
Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484
|||| |||||||| || ||||||| | | ||||||||||| ||||| ||| ||||| |
Sbjct 2220372 CAATCGTCATACGCGACGGAATGGCGTGCGGGTTGATGATAATGTCGGGCGTGATGCCCT 2220313
Query 364485 CAGCGGTAAAGGGCATATCTTCGGGA-GGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543
| | ||||| ||||| || || | | || ||| | | |||||| || ||||| || |
Sbjct 2220312 CCACCGTAAACGGCATGTCCTCCGAACGGTACG-TCACACCAATCGTGCCCTTCTGTCCG 2220254
Query 364544 TAGCGAGAAGCAAACTTGTCGCCAAT 364569
| || || |||||||||||||||||
Sbjct 2220253 TGTCGCGACGCAAACTTGTCGCCAAT 2220228
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884885772097218
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |