Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raffaelea_20quercivora_20[genbank_20GCA_5F001662465.1_202016-06-08] 26 sequences; 25,862,907 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq4 98.7 4e-15 >seq4 Length=2521912 Score = 98.7 bits (108), Expect = 4e-15 Identities = 111/146 (76%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| |||||||| || ||||||| | | ||||||||||| ||||| ||| ||||| | Sbjct 2220372 CAATCGTCATACGCGACGGAATGGCGTGCGGGTTGATGATAATGTCGGGCGTGATGCCCT 2220313 Query 364485 CAGCGGTAAAGGGCATATCTTCGGGA-GGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543 | | ||||| ||||| || || | | || ||| | | |||||| || ||||| || | Sbjct 2220312 CCACCGTAAACGGCATGTCCTCCGAACGGTACG-TCACACCAATCGTGCCCTTCTGTCCG 2220254 Query 364544 TAGCGAGAAGCAAACTTGTCGCCAAT 364569 | || || ||||||||||||||||| Sbjct 2220253 TGTCGCGACGCAAACTTGTCGCCAAT 2220228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884885772097218