Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercus-
mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq38 459 5e-127
>seq38
Length=4042462
Score = 459 bits (508), Expect = 5e-127
Identities = 291/314 (93%), Gaps = 1/314 (0%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
|||||||||||||||||||| |||||||| ||||||||||||||||||| ||| ||||||
Sbjct 475502 TGGTCCGGCCGGGCCTTTCCCTCTGGGGAGCCGCATGCCCTTCACTGGGCGTGTCGGGGA 475561
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct 475562 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCTCGAATACAT 475621
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct 475622 TAGCATGGAATAATAGAATAGGACGCGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 475681
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||| ||||||||| |||||||||| ||| |||||||||||||||||
Sbjct 475682 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAGTTGCGAGAGGTGAAATTCTTGG 475741
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
| | ||||||||||||||||||||||| || ||||||||||||||||||||||| ||
Sbjct 475742 ACCAACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG-GA 475800
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 475801 ACGAAAGTTAGGGG 475814
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915199606464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |