Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raffaelea_20quercus- mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq38 459 5e-127 >seq38 Length=4042462 Score = 459 bits (508), Expect = 5e-127 Identities = 291/314 (93%), Gaps = 1/314 (0%) Strand=Plus/Plus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 |||||||||||||||||||| |||||||| ||||||||||||||||||| ||| |||||| Sbjct 475502 TGGTCCGGCCGGGCCTTTCCCTCTGGGGAGCCGCATGCCCTTCACTGGGCGTGTCGGGGA 475561 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct 475562 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCTCGAATACAT 475621 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct 475622 TAGCATGGAATAATAGAATAGGACGCGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 475681 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||| ||||||||| |||||||||| ||| ||||||||||||||||| Sbjct 475682 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAGTTGCGAGAGGTGAAATTCTTGG 475741 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 | | ||||||||||||||||||||||| || ||||||||||||||||||||||| || Sbjct 475742 ACCAACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG-GA 475800 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 475801 ACGAAAGTTAGGGG 475814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199606464