Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercus-
mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq38 702 0.0
>seq38
Length=4042462
Score = 702 bits (778), Expect = 0.0
Identities = 562/672 (84%), Gaps = 9/672 (1%)
Strand=Plus/Plus
Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72
|||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 477402 GCCTAGCCTCTGTGAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATG 477461
Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 477462 GGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGT 477521
Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAG 192
|||||||||||||||||||||||| |||||| || ||| || ||||||||||||||||||
Sbjct 477522 GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTCAAACAGTACGTGAAATTGTTGAAAG 477581
Query 193 GGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCAC 251
|||||||| | |||||||||| | | | ||||| ||||| ||| ||||| ||||
Sbjct 477582 GGAAGCGCCCGTGGCCAGACTTGCGCCCCGCGGCTCACCCGGCGGACTCCGCCGGGGCAC 477641
Query 252 TCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGC 311
| | | | |||||||||||| |||| | | ||| || | | |||||| |||||
Sbjct 477642 GCCGCGGGGTGCAGGCCAGCATCGGCTCTTCCAGGGGGACAAGGACGGCGGGAACGTGGC 477701
Query 312 CCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCG 371
|| || ||| ||||||||||||| | | |||| || | || | |||| |||||
Sbjct 477702 TCC--TCCGGGAGTGTTATAGCCCGCCGCGCCATGC-CCCTGGGGGGGCCGAGGACCGCG 477758
Query 372 CTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGG 431
|| |||| |||||||||||||||||| ||| ||||||||| ||||||||||||||
Sbjct 477759 CTTCGGCAAGGATGCTGGCGTAATGGCCACCGGCGACCCGTCTTGAAACACGGACCAAGG 477818
Query 432 AGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGG 491
|||| | ||| |||||||| |||||| |||||||| |||| ||||||||||||||
Sbjct 477819 AGTCAAGCATTGGGGCGAGTGTCTGGGTGGCAAACCCGCACGCGAAATGAAAGTGAACGC 477878
Query 492 AGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAG 551
||||| || | || |||||| ||||||||||||||||| |||||||||||||||
Sbjct 477879 AGGTGAGA----GCTTCGGCGCACCACCGACCGATCCTGATGTCCTCGGATGGATTTGAG 477934
Query 552 TAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCA 611
||||||| | | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 477935 TAAGAGCCCCACCGCTTGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCA 477994
Query 612 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGG 671
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 477995 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGG 478054
Query 672 GTATAGGGGCGA 683
| || |||||||
Sbjct 478055 GCATGGGGGCGA 478066
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999077650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |