Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercus-
mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq7 98.7 3e-18
>seq7
Length=106194
Score = 98.7 bits (108), Expect = 3e-18
Identities = 135/187 (72%), Gaps = 4/187 (2%)
Strand=Plus/Plus
Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365
||| |||||||| || |||| | ||||||| | |||||| ||| | | ||||||
Sbjct 50911 CAAGTCATCATGGCCTTTATATTGTGGGCTATAGACGTGCCACATATTCCTAGACAAAGA 50970
Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTC---TCAGTTC-GGATTGT 421
| |||||| |||| |||||| |||| || ||| | | | || | |||||||
Sbjct 50971 GAGGCGAAAATGCGAATTCAAGCTAATCTCAAAAAATAGGATAAATTAGATAAGGATTGT 51030
Query 422 AGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACG 481
|||||| ||||||||| ||||| | ||| ||||||||||| |||| |||| |||
Sbjct 51031 AGTCTGAAACTCGACTGCATGAATAAGTAATTACTAGTAATCGTGAATCACCATGTCACG 51090
Query 482 GTGAATA 488
|||||||
Sbjct 51091 GTGAATA 51097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503999353280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |