Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raffaelea_20quercus- mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq7 98.7 3e-18 >seq7 Length=106194 Score = 98.7 bits (108), Expect = 3e-18 Identities = 135/187 (72%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| || |||| | ||||||| | |||||| ||| | | |||||| Sbjct 50911 CAAGTCATCATGGCCTTTATATTGTGGGCTATAGACGTGCCACATATTCCTAGACAAAGA 50970 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTC---TCAGTTC-GGATTGT 421 | |||||| |||| |||||| |||| || ||| | | | || | ||||||| Sbjct 50971 GAGGCGAAAATGCGAATTCAAGCTAATCTCAAAAAATAGGATAAATTAGATAAGGATTGT 51030 Query 422 AGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACG 481 |||||| ||||||||| ||||| | ||| ||||||||||| |||| |||| ||| Sbjct 51031 AGTCTGAAACTCGACTGCATGAATAAGTAATTACTAGTAATCGTGAATCACCATGTCACG 51090 Query 482 GTGAATA 488 ||||||| Sbjct 51091 GTGAATA 51097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503999353280