Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercus-
mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq38 338 1e-90
>seq38
Length=4042462
Score = 338 bits (374), Expect = 1e-90
Identities = 230/257 (89%), Gaps = 1/257 (0%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 476315 ACTCGCTGGCTCTGTCAGTGTAACGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 476256
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||
Sbjct 476255 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 476197
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
| ||| || | |||||||||||||||||||||||||||||||||||| ||||
Sbjct 476196 CGCTGCCAGAGCAGCGCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCGATTAG 476137
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 476136 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACGAAATCAAGAA 476077
Query 242 AGAGCTATCAATCTGTC 258
|||||| ||||||||||
Sbjct 476076 AGAGCTCTCAATCTGTC 476060
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796799668083
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |