Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raffaelea_20quercus- mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq38 181 1e-43 >seq38 Length=4042462 Score = 181 bits (200), Expect = 1e-43 Identities = 159/193 (82%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | | |||||||||||||||||||||||||||||||||| Sbjct 475672 CTAGAAACCAACAAAATAGAACCACGCGTCCTATTCTATTATTCCATGCTAATGTATTCG 475613 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || ||||||||||||||||||||||||||| |||| ||||||||||||||||| | || Sbjct 475612 AGCATAAGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACA 475553 Query 126 C-ACCAATGAA-GGCATACGGGCTCACCA-AGAGGTAGGGCTGGGTAATGCAGTACTCGC 182 | ||| |||| ||||| | ||||| ||| || | ||| | || |||| | ||| Sbjct 475552 CGCCCAGTGAAGGGCATGC-GGCTCCCCAGAGGGAAAGGCCCGGCCGGACCAGTGCACGC 475494 Query 183 CGTGAGGCGGACC 195 |||||||||||| Sbjct 475493 GGTGAGGCGGACC 475481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595199752062