Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercus-
mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq38 181 1e-43
>seq38
Length=4042462
Score = 181 bits (200), Expect = 1e-43
Identities = 159/193 (82%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||
Sbjct 475672 CTAGAAACCAACAAAATAGAACCACGCGTCCTATTCTATTATTCCATGCTAATGTATTCG 475613
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| ||||||||||||||||||||||||||| |||| ||||||||||||||||| | ||
Sbjct 475612 AGCATAAGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACA 475553
Query 126 C-ACCAATGAA-GGCATACGGGCTCACCA-AGAGGTAGGGCTGGGTAATGCAGTACTCGC 182
| ||| |||| ||||| | ||||| ||| || | ||| | || |||| | |||
Sbjct 475552 CGCCCAGTGAAGGGCATGC-GGCTCCCCAGAGGGAAAGGCCCGGCCGGACCAGTGCACGC 475494
Query 183 CGTGAGGCGGACC 195
||||||||||||
Sbjct 475493 GGTGAGGCGGACC 475481
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595199752062
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