Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raffaelea_20quercus- mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq38 446 3e-123 >seq38 Length=4042462 Score = 446 bits (494), Expect = 3e-123 Identities = 285/309 (92%), Gaps = 2/309 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | | ||| |||| | |||||||||||||| Sbjct 476151 GAACGAGACCTTAACCTGCTAAATAGCCCGCGCTGCTCTGGCAGCGCGCCGGCTTCTTAG 476210 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 476211 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 476270 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||| |||||||||||||||| ||||||| | ||||||||| Sbjct 476271 GATGTTCTGGGCCGCACGCGCGTTACACTGACAGAGCCAGCGAGTTCTT--CCTTGGCCG 476328 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 |||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 476329 AAAGGCCCGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 476388 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||| |||||||||||| ||||||| | |||||||||||||||||| Sbjct 476389 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAACTTGCGTTGATTACGTCCCTG 476448 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 476449 CCCTTTGTA 476457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199592704