Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercus-
mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq38 744 0.0
seq39 78.8 3e-12
>seq38
Length=4042462
Score = 744 bits (824), Expect = 0.0
Identities = 468/504 (93%), Gaps = 1/504 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 475345 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 475286
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 475285 CCCCGAGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 475226
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| ||||||| |||| |||||| | ||||||||||||| |||| ||
Sbjct 475225 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGTCACCACGGCT 475166
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||| | || || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 475165 GGCCAAGACCCAGCCGTCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 475106
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||| ||||||||| |||||||||||||||||| ||||||||||||||| ||||
Sbjct 475105 CAAGGCCGTGCGATTCGAGCAGTTATTATGAATCACCAGGGAGCCCCGAAGGGCATTGGC 475046
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct 475045 TTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGGTTTTCAGCATGTATTAGCTCTAG 474986
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
|||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct 474985 AATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAGACGATAACTGATTTAATGA 474926
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 474925 GCCATTCGCAGTTTCGCGGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 474867
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 474866 AGACAAGCATATGACTACTGGCAG 474843
>seq39
Length=779030
Score = 78.8 bits (86), Expect = 3e-12
Identities = 46/48 (96%), Gaps = 0/48 (0%)
Strand=Plus/Minus
Query 21 ACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGT 68
||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct 292496 ACCCAAAAGAGCCTTGTATCAGTATTTATTGTCACTACCTCCCCGAGT 292449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510399350528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |