Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercus-
mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq41 358 5e-94
seq42 140 3e-28
>seq41
Length=3900177
Score = 358 bits (396), Expect = 5e-94
Identities = 1231/1885 (65%), Gaps = 62/1885 (3%)
Strand=Plus/Plus
Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136
|||||||||||||||||||| | || || |||| || | || ||||||||||| ||
Sbjct 916946 ATCGACCGTGAACTGGATCGGCTGTGCGGCAGCCTGCGTGCGCAGGTAGTACATGCCCGT 917005
Query 65137 CTTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGC 65194
||| ||||| ||| ||| | ||| ||||| | | | || |||| | |||||
Sbjct 917006 CTTCAGGCCCAGCTT-CCAGCCCGTGAAGTGCAT-GCTCGTGATCTTGCCCATGGTCGGC 917063
Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254
|| || || || |||| |||||| ||| ||||| | |||||| || ||||||
Sbjct 917064 TCACGCATGTGGATGTTCAGCGACTGCGACTGGTCGATAAAGGCACCACGGTCCGCAGCC 917123
Query 65255 ATGT---CAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-AC 65310
|| | |||| | || | || |||||||| || ||||||||||| | | | |
Sbjct 917124 ATCTGCACAATCGTCCGCTGA---GAGATCTCCCACACCGTCTTGTACAGA-GCCTTGAT 917179
Query 65311 CTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACG 65370
|| || || | ||||| ||||| ||||| ||||| ||||| ||
Sbjct 917180 GTCTGCCGGGATGTTGGGAATGTTCTGGATCGAACCGTTCTCGGCAATGATGCGGTTCTT 917239
Query 65371 CATCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATG 65428
||| || ||||||| ||||| |||| || | |||| | || ||| ||||
Sbjct 917240 CATGTTGTCCGACCACAGACCCATGTCGACCAGGTCCTTGAGC--AGCCACGGGTTGACC 917297
Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488
|| |||||||| |||| ||| ||||| || || |||||||| ||| || || |||
Sbjct 917298 ACCTGGAACTCACCGGCCAGCACACGCCGCGAGTAAATGTTGGATGTGTACGGCTCGAAG 917357
Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAAT 65548
| || ||||||| ||||| || | || || || || ||||| || || |||| ||
Sbjct 917358 CACTCGTTGTTGCCCAGAATCTGTGACGTCGACGCCGTCGGCATCGGCGCCACCAGCAGA 917417
Query 65549 GAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA--TCG 65606
||| |||| |||| | | || || | |||| |||||| | ||||| ||
Sbjct 917418 CTGTTGCGCACACCGTGCTCCTTGATCTTCAGCCGCAGCGAGTCCCAATCCCACAGGTCC 917477
Query 65607 GTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCC--GATACTGGCCGG 65664
| | ||| ||||||| ||||| || | ||||| | || | || | ||
Sbjct 917478 GATGG-CGT-GACATCC------CACATGTCGGGCTGCAGAATACCCTGCGACA--CAGG 917527
Query 65665 TGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCG-- 65722
|| || | | | ||| ||||| |||||| || | || | || ||
Sbjct 917528 AGACCCCTCATATGTCTGGTAGGTGCCCTCAATCTTGGCCAGCTCGCA-CGACTC-CGTC 917585
Query 65723 AGTGCGGCAAAATAAATGGTCTCGAAAA--TGCGTCGATTAAGTTCACGTGCCTCATCGC 65780
|| || || || |||||||| || | ||| | || || ||||||||
Sbjct 917586 AGCGCCGCGTGGTAGATGGTCTCAAAGACCTGCTTG--TTCAGCAGGCGTGCCTCGGGAG 917643
Query 65781 TCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGA 65840
||| | ||||| | || | | || | ||| |||||||| || || || | ||| |
Sbjct 917644 ACTCAAAGGGCATGCGCAGCGCCAGGAAGGCGTCCGCCAGACCCTGCACACCCAGACCAA 917703
Query 65841 TGGGACGATGACGCAAATTGGAACGTCTCG--CCTCAGGTACAGGGTAGTAATTGATATC 65898
||||||| || |||| || | || || | || || ||||||||||| |||| |||
Sbjct 917704 TGGGACGGTGGCGCATGTT--ACTGTTCCGTGCTTCTGGCACAGGGTAGTAGTTGACATC 917761
Query 65899 GATAATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAAT 65957
|| ||||| |||| ||||| |||| ||| || | ||| ||| | | ||| |
Sbjct 917762 AATGATGCGGTTCAGGTTGCGGACAACCAGCTGCGTGACATCGT-GCAGTCTCTGGAAGT 917820
Query 65958 CAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATG 66017
|| || ||| ||| | | || | | || ||||| || | ||| |
Sbjct 917821 CA-------TACGAC--TCGTTGTTATAGTCGACGAAAGAC---GGAAGAGCCAAAGAGG 917868
Query 66018 CGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGAT 66077
| | |||||| ||||| | |||||| ||||| | ||||||||||| || ||||||| |
Sbjct 917869 CCAAGTTGCACACAGCCACCTCGTCCGGAGCCGAGTACTCGACAATCTCCGTGCACAAGT 917928
Query 66078 TACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGT 66137
| || ||| ||||| |||| |||| || || |||||||| ||||| |||||||
Sbjct 917929 TCGAGCTGCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGT 917988
Query 66138 ACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGC 66197
| | |||| | || |||| ||||| || | ||| | ||||| | ||| ||
Sbjct 917989 AGAGCATGAAGGGGTTGCCCGTCTCCGTCTGCGCCTCCAGAATGGCATACCACAGCTTCT 918048
Query 66198 GTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCG 66256
| ||||| | | | | | | || | ||| | ||| ||||| | ||||| || ||
Sbjct 918049 GGGCCTTGATCTT-CTTGCGACCGCGACCCTCGCGCTCGTATTTCTCGTACAGAGCCTCA 918107
Query 66257 AAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAA 66316
|| || || | || | ||| | | || | || || |||||||||| |||
Sbjct 918108 AACTCCTCGCCGTAGCAATCAGCCAGGCCGGCGCATTCGTTGGGGCACATCAGCGTCCAC 918167
Query 66317 TCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGA 66376
|| || | || || ||||| ||| || || || || |||||||| ||| ||| |||
Sbjct 918168 TCGCCGTTCTTCTCCACACGCTTCATGAACAGGTCGGGGATCCAGAGTGCGAGGAAAAGA 918227
Query 66377 TCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATG 66436
|| || || || |||||| |||| || || || |||| |||||||||||||||||
Sbjct 918228 TCACGGGCACGGACCTCCTCCTTGCCTTGGTTCTTCCGCAGGTCGAGGAACTCAAAGACA 918287
Query 66437 TCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGG 66496
||||||||||| || |||| ||||||| ||| | || || ||| |||||| ||
Sbjct 918288 TCGGCATGCCACGGCTCCAAGTAGATGCAGAATGCACCGGGCCGCTTGTTGCCACCCTGA 918347
Query 66497 TCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTG 66556
|| |||||||| || |||||||||||||| | ||| || | || ||||| ||| ||
Sbjct 918348 TCCACGTAGCGGGCCGTGTTGTTGAAGACACGAAGCATGGGGATGATGCCGTTGGATGTG 918407
Query 66557 CCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATA 66616
|| || |||||| | ||| || || || || || || ||||||||||| ||
Sbjct 918408 CCGTTAGTGCCGGCAATGTAAGAGCCGGTAGCACGAATGCGATGGACATTCAGACCGATG 918467
Query 66617 CCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGCCGTCAA 66674
||||| |||||||| ||||| ||||| || | | || | | ||||| ||||
Sbjct 918468 CCACCAGCCGTCTTGGAGATCATGGCACA--CGTCTTGAGCGTGTCGTAGATGCCCTCAA 918525
Query 66675 TGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGG 66734
|| ||| |||| ||| | |||| |||| || || || | | ||| ||| |||
Sbjct 918526 TGCTATCATCCTTCATGTCTACGAGGAAGCAGGAGGACAGCTGAGCCTGGGGCGTGCCGG 918585
Query 66735 CCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCT 66794
| ||| || || || | || ||||||||| | | | |||||||| ||||| ||||
Sbjct 918586 CGTTGAAAAGCGTCGGCGAGGCATGCGTAAAGAACTTGTTCGACATGTAGTTGTATGTCT 918645
Query 66795 CGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATT 66854
||| ||| || | | ||||| || || | || ||||| | | || |
Sbjct 918646 CGACAACACGCTCCACATCATCGCCCCAGATACCAACGGCCACGCGCATAATCATGTGCT 918705
Query 66855 GAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGA 66914
| ||||| ||||| | | | | | || | | | |||||| || |||||||||||||
Sbjct 918706 GCGGCCGCTCGACGATCTTACCATCGAGCTTGAGGAGGTAGGACCGCTCCAGGGTCTTGA 918765
Query 66915 TACCAAAGTACGAGTAATTGAAATC 66939
|||||||| ||| ||||| ||
Sbjct 918766 AGCCAAAGTATTGGTAGTTGAAGTC 918790
>seq42
Length=705881
Score = 140 bits (154), Expect = 3e-28
Identities = 235/334 (70%), Gaps = 7/334 (2%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||| || |||||||||||||||| |||||| | ||| ||
Sbjct 322262 ATCTGGCAGATGTACAAGAAGCACGAGGCTTCCTTCTGGACGGCCGAGGAGATTGATCTG 322203
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202
||||| ||| || | |||||| | || | | ||| || || | |||||
Sbjct 322202 TCCAAGGACCTGCACGACTGGCACAACCGCCTGAACGA-CGACGAGCGTTTCTTCATCTC 322144
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
|| | | || ||||| || || || || || |||||||| ||||| | | || ||
Sbjct 322143 CCACATTCTCGCCTTCTTCGCTGCCTCTGATGGCATCGTCAACGAGAACCTCGTCGAGCG 322084
Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321
||| |||| | |||| || ||| | ||||| || || ||||| ||||||||||| |
Sbjct 322083 CTTCAGCGCTG-AGGTCCAGGTGCCTGAGGCTCGCTGCTTCTATGGCTTCCAGATCATGA 322025
Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381
||||||| |||||||||||| |||| | | ||||| || || ||||||| |||||
Sbjct 322024 TGGAGAACATCCACTCGGAGACGTACTCTCTGCTCATTGACACCTACATCAAGGAGCCCA 321965
Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGAC 61415
||| || || | | ||||| ||||| || ||
Sbjct 321964 AGGAGCGCGACCACCTTTTCAACGCCATTGATAC 321931
Score = 131 bits (144), Expect = 1e-25
Identities = 293/437 (67%), Gaps = 5/437 (1%)
Strand=Plus/Minus
Query 61496 TGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGT 61555
||||||| || | || ||||| | || ||||| || | || | | ||||| |||
Sbjct 321793 TGGCATTCGCTGCCGTTGAGGGCATTTTCTTCAGCGGCGCCTTCTCTTCCATCTTCTGGC 321734
Query 61556 TGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACG 61615
| ||||| ||||| || ||||| |||||||| ||| ||||||| |||| || |||||||
Sbjct 321733 TCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCTCCAATGAGCTGATTTCCCGCGACG 321674
Query 61616 AGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGT 61675
|||| |||| || ||||| |||| ||| | | ||| || || |||
Sbjct 321673 AGGGGCTGCACACCGACTTTGCCTGCCTGCTGTTC---TCCCACCTGAACAACCGCCCGA 321617
Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735
|| || | || ||| || || || || | || || ||||| || ||||
Sbjct 321616 GCAAGCAGATGATCCAGGACATTATTGTCGATGCTGTCAAGATTGAGCAGGAGTTCCTGA 321557
Query 61736 CTGACGCTTTGCCCGTCT-CACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATT 61794
| || ||| || |||| | | || | |||||||| | || ||| |||||| |||
Sbjct 321556 CGGAGGCTCTG-CCGTGTGCTCTGCTGGGCATGAACTCCACCCTCATGAAGCAGTACATT 321498
Query 61795 GAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAA 61854
|| |||||||||||||||||| |||||| | || | | | | || | | |
Sbjct 321497 GAGTTTGTTGCCGACCGTCTGCTGGTCGCCCTCGGCAACGACAAGGTGTACCGTTCCACC 321438
Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914
||||| || || || ||||| | || || |||| ||||||||| || || || |||||
Sbjct 321437 AACCCCTTCGACTTTATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTTGAGAAG 321378
Query 61915 CGTGTAGGCGACTATCA 61931
|| || || ||||| ||
Sbjct 321377 CGCGTCGGTGACTACCA 321361
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567791649520
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