Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raffaelea_20quercus- mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq41 358 5e-94 seq42 140 3e-28 >seq41 Length=3900177 Score = 358 bits (396), Expect = 5e-94 Identities = 1231/1885 (65%), Gaps = 62/1885 (3%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||||||||||||||||| | || || |||| || | || ||||||||||| || Sbjct 916946 ATCGACCGTGAACTGGATCGGCTGTGCGGCAGCCTGCGTGCGCAGGTAGTACATGCCCGT 917005 Query 65137 CTTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGC 65194 ||| ||||| ||| ||| | ||| ||||| | | | || |||| | ||||| Sbjct 917006 CTTCAGGCCCAGCTT-CCAGCCCGTGAAGTGCAT-GCTCGTGATCTTGCCCATGGTCGGC 917063 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || || || || |||| |||||| ||| ||||| | |||||| || |||||| Sbjct 917064 TCACGCATGTGGATGTTCAGCGACTGCGACTGGTCGATAAAGGCACCACGGTCCGCAGCC 917123 Query 65255 ATGT---CAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-AC 65310 || | |||| | || | || |||||||| || ||||||||||| | | | | Sbjct 917124 ATCTGCACAATCGTCCGCTGA---GAGATCTCCCACACCGTCTTGTACAGA-GCCTTGAT 917179 Query 65311 CTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACG 65370 || || || | ||||| ||||| ||||| ||||| ||||| || Sbjct 917180 GTCTGCCGGGATGTTGGGAATGTTCTGGATCGAACCGTTCTCGGCAATGATGCGGTTCTT 917239 Query 65371 CATCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATG 65428 ||| || ||||||| ||||| |||| || | |||| | || ||| |||| Sbjct 917240 CATGTTGTCCGACCACAGACCCATGTCGACCAGGTCCTTGAGC--AGCCACGGGTTGACC 917297 Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488 || |||||||| |||| ||| ||||| || || |||||||| ||| || || ||| Sbjct 917298 ACCTGGAACTCACCGGCCAGCACACGCCGCGAGTAAATGTTGGATGTGTACGGCTCGAAG 917357 Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAAT 65548 | || ||||||| ||||| || | || || || || ||||| || || |||| || Sbjct 917358 CACTCGTTGTTGCCCAGAATCTGTGACGTCGACGCCGTCGGCATCGGCGCCACCAGCAGA 917417 Query 65549 GAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA--TCG 65606 ||| |||| |||| | | || || | |||| |||||| | ||||| || Sbjct 917418 CTGTTGCGCACACCGTGCTCCTTGATCTTCAGCCGCAGCGAGTCCCAATCCCACAGGTCC 917477 Query 65607 GTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCC--GATACTGGCCGG 65664 | | ||| ||||||| ||||| || | ||||| | || | || | || Sbjct 917478 GATGG-CGT-GACATCC------CACATGTCGGGCTGCAGAATACCCTGCGACA--CAGG 917527 Query 65665 TGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCG-- 65722 || || | | | ||| ||||| |||||| || | || | || || Sbjct 917528 AGACCCCTCATATGTCTGGTAGGTGCCCTCAATCTTGGCCAGCTCGCA-CGACTC-CGTC 917585 Query 65723 AGTGCGGCAAAATAAATGGTCTCGAAAA--TGCGTCGATTAAGTTCACGTGCCTCATCGC 65780 || || || || |||||||| || | ||| | || || |||||||| Sbjct 917586 AGCGCCGCGTGGTAGATGGTCTCAAAGACCTGCTTG--TTCAGCAGGCGTGCCTCGGGAG 917643 Query 65781 TCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGA 65840 ||| | ||||| | || | | || | ||| |||||||| || || || | ||| | Sbjct 917644 ACTCAAAGGGCATGCGCAGCGCCAGGAAGGCGTCCGCCAGACCCTGCACACCCAGACCAA 917703 Query 65841 TGGGACGATGACGCAAATTGGAACGTCTCG--CCTCAGGTACAGGGTAGTAATTGATATC 65898 ||||||| || |||| || | || || | || || ||||||||||| |||| ||| Sbjct 917704 TGGGACGGTGGCGCATGTT--ACTGTTCCGTGCTTCTGGCACAGGGTAGTAGTTGACATC 917761 Query 65899 GATAATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAAT 65957 || ||||| |||| ||||| |||| ||| || | ||| ||| | | ||| | Sbjct 917762 AATGATGCGGTTCAGGTTGCGGACAACCAGCTGCGTGACATCGT-GCAGTCTCTGGAAGT 917820 Query 65958 CAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATG 66017 || || ||| ||| | | || | | || ||||| || | ||| | Sbjct 917821 CA-------TACGAC--TCGTTGTTATAGTCGACGAAAGAC---GGAAGAGCCAAAGAGG 917868 Query 66018 CGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGAT 66077 | | |||||| ||||| | |||||| ||||| | ||||||||||| || ||||||| | Sbjct 917869 CCAAGTTGCACACAGCCACCTCGTCCGGAGCCGAGTACTCGACAATCTCCGTGCACAAGT 917928 Query 66078 TACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGT 66137 | || ||| ||||| |||| |||| || || |||||||| ||||| ||||||| Sbjct 917929 TCGAGCTGCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGT 917988 Query 66138 ACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGC 66197 | | |||| | || |||| ||||| || | ||| | ||||| | ||| || Sbjct 917989 AGAGCATGAAGGGGTTGCCCGTCTCCGTCTGCGCCTCCAGAATGGCATACCACAGCTTCT 918048 Query 66198 GTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCG 66256 | ||||| | | | | | | || | ||| | ||| ||||| | ||||| || || Sbjct 918049 GGGCCTTGATCTT-CTTGCGACCGCGACCCTCGCGCTCGTATTTCTCGTACAGAGCCTCA 918107 Query 66257 AAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAA 66316 || || || | || | ||| | | || | || || |||||||||| ||| Sbjct 918108 AACTCCTCGCCGTAGCAATCAGCCAGGCCGGCGCATTCGTTGGGGCACATCAGCGTCCAC 918167 Query 66317 TCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGA 66376 || || | || || ||||| ||| || || || || |||||||| ||| ||| ||| Sbjct 918168 TCGCCGTTCTTCTCCACACGCTTCATGAACAGGTCGGGGATCCAGAGTGCGAGGAAAAGA 918227 Query 66377 TCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATG 66436 || || || || |||||| |||| || || || |||| ||||||||||||||||| Sbjct 918228 TCACGGGCACGGACCTCCTCCTTGCCTTGGTTCTTCCGCAGGTCGAGGAACTCAAAGACA 918287 Query 66437 TCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGG 66496 ||||||||||| || |||| ||||||| ||| | || || ||| |||||| || Sbjct 918288 TCGGCATGCCACGGCTCCAAGTAGATGCAGAATGCACCGGGCCGCTTGTTGCCACCCTGA 918347 Query 66497 TCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTG 66556 || |||||||| || |||||||||||||| | ||| || | || ||||| ||| || Sbjct 918348 TCCACGTAGCGGGCCGTGTTGTTGAAGACACGAAGCATGGGGATGATGCCGTTGGATGTG 918407 Query 66557 CCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATA 66616 || || |||||| | ||| || || || || || || ||||||||||| || Sbjct 918408 CCGTTAGTGCCGGCAATGTAAGAGCCGGTAGCACGAATGCGATGGACATTCAGACCGATG 918467 Query 66617 CCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGCCGTCAA 66674 ||||| |||||||| ||||| ||||| || | | || | | ||||| |||| Sbjct 918468 CCACCAGCCGTCTTGGAGATCATGGCACA--CGTCTTGAGCGTGTCGTAGATGCCCTCAA 918525 Query 66675 TGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGG 66734 || ||| |||| ||| | |||| |||| || || || | | ||| ||| ||| Sbjct 918526 TGCTATCATCCTTCATGTCTACGAGGAAGCAGGAGGACAGCTGAGCCTGGGGCGTGCCGG 918585 Query 66735 CCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCT 66794 | ||| || || || | || ||||||||| | | | |||||||| ||||| |||| Sbjct 918586 CGTTGAAAAGCGTCGGCGAGGCATGCGTAAAGAACTTGTTCGACATGTAGTTGTATGTCT 918645 Query 66795 CGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATT 66854 ||| ||| || | | ||||| || || | || ||||| | | || | Sbjct 918646 CGACAACACGCTCCACATCATCGCCCCAGATACCAACGGCCACGCGCATAATCATGTGCT 918705 Query 66855 GAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGA 66914 | ||||| ||||| | | | | | || | | | |||||| || ||||||||||||| Sbjct 918706 GCGGCCGCTCGACGATCTTACCATCGAGCTTGAGGAGGTAGGACCGCTCCAGGGTCTTGA 918765 Query 66915 TACCAAAGTACGAGTAATTGAAATC 66939 |||||||| ||| ||||| || Sbjct 918766 AGCCAAAGTATTGGTAGTTGAAGTC 918790 >seq42 Length=705881 Score = 140 bits (154), Expect = 3e-28 Identities = 235/334 (70%), Gaps = 7/334 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||| || |||||||||||||||| |||||| | ||| || Sbjct 322262 ATCTGGCAGATGTACAAGAAGCACGAGGCTTCCTTCTGGACGGCCGAGGAGATTGATCTG 322203 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| ||| || | |||||| | || | | ||| || || | ||||| Sbjct 322202 TCCAAGGACCTGCACGACTGGCACAACCGCCTGAACGA-CGACGAGCGTTTCTTCATCTC 322144 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || | | || ||||| || || || || || |||||||| ||||| | | || || Sbjct 322143 CCACATTCTCGCCTTCTTCGCTGCCTCTGATGGCATCGTCAACGAGAACCTCGTCGAGCG 322084 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| |||| | |||| || ||| | ||||| || || ||||| ||||||||||| | Sbjct 322083 CTTCAGCGCTG-AGGTCCAGGTGCCTGAGGCTCGCTGCTTCTATGGCTTCCAGATCATGA 322025 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 ||||||| |||||||||||| |||| | | ||||| || || ||||||| ||||| Sbjct 322024 TGGAGAACATCCACTCGGAGACGTACTCTCTGCTCATTGACACCTACATCAAGGAGCCCA 321965 Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGAC 61415 ||| || || | | ||||| ||||| || || Sbjct 321964 AGGAGCGCGACCACCTTTTCAACGCCATTGATAC 321931 Score = 131 bits (144), Expect = 1e-25 Identities = 293/437 (67%), Gaps = 5/437 (1%) Strand=Plus/Minus Query 61496 TGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGT 61555 ||||||| || | || ||||| | || ||||| || | || | | ||||| ||| Sbjct 321793 TGGCATTCGCTGCCGTTGAGGGCATTTTCTTCAGCGGCGCCTTCTCTTCCATCTTCTGGC 321734 Query 61556 TGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACG 61615 | ||||| ||||| || ||||| |||||||| ||| ||||||| |||| || ||||||| Sbjct 321733 TCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCTCCAATGAGCTGATTTCCCGCGACG 321674 Query 61616 AGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGT 61675 |||| |||| || ||||| |||| ||| | | ||| || || ||| Sbjct 321673 AGGGGCTGCACACCGACTTTGCCTGCCTGCTGTTC---TCCCACCTGAACAACCGCCCGA 321617 Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735 || || | || ||| || || || || | || || ||||| || |||| Sbjct 321616 GCAAGCAGATGATCCAGGACATTATTGTCGATGCTGTCAAGATTGAGCAGGAGTTCCTGA 321557 Query 61736 CTGACGCTTTGCCCGTCT-CACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATT 61794 | || ||| || |||| | | || | |||||||| | || ||| |||||| ||| Sbjct 321556 CGGAGGCTCTG-CCGTGTGCTCTGCTGGGCATGAACTCCACCCTCATGAAGCAGTACATT 321498 Query 61795 GAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAA 61854 || |||||||||||||||||| |||||| | || | | | | || | | | Sbjct 321497 GAGTTTGTTGCCGACCGTCTGCTGGTCGCCCTCGGCAACGACAAGGTGTACCGTTCCACC 321438 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914 ||||| || || || ||||| | || || |||| ||||||||| || || || ||||| Sbjct 321437 AACCCCTTCGACTTTATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTTGAGAAG 321378 Query 61915 CGTGTAGGCGACTATCA 61931 || || || ||||| || Sbjct 321377 CGCGTCGGTGACTACCA 321361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567791649520