Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raffaelea_20quercus- mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq11 86.0 3e-11 >seq11 Length=5116797 Score = 86.0 bits (94), Expect = 3e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 349079 AGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAG 349138 ||||| |||||||||| |||| ||||| ||||||||||| | || || || |||||| Sbjct 3842676 AGAATTTCCTTGAGTCGTGGCACACCCAGCGTCACGTTCTTCGACGACACACCAGCAAAG 3842617 Query 349139 TGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATG 349198 ||||| || | || |||| |||||| || || || || |||| | || || | Sbjct 3842616 TGGAACGTGTTCAGCGTCATCTGCGTTGCAGGTTCACCAATCGACTGCGCTGCCAGCACA 3842557 Query 349199 CCTACCATCTCGCCGGG 349215 || ||||||||||| || Sbjct 3842556 CCCACCATCTCGCCTGG 3842540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084738023425314