Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raffaelea_20quercus- mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq43 104 9e-17 >seq43 Length=799317 Score = 104 bits (114), Expect = 9e-17 Identities = 112/146 (77%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||||||||| ||||||| | | ||||||||||| ||||| ||| ||||| | Sbjct 314555 CAATGGTCATACGAGACGGAATGGCGTGCGGGTTGATGATAATGTCGGGCGTAATGCCCT 314614 Query 364485 CAGCGGTAAAGGGCATAT-CTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543 | | ||||| ||||| | || || || ||| | | |||||| || ||||| || | Sbjct 314615 CCACCGTAAACGGCATGTCCTCCGACCGGTACG-TTACACCAATCGTACCCTTCTGTCCG 314673 Query 364544 TAGCGAGAAGCAAACTTGTCGCCAAT 364569 | ||||| ||||||||||||||||| Sbjct 314674 TGTCGAGAGGCAAACTTGTCGCCAAT 314699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884885361545399