Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ramalina_20peruviana_20[genbank_20GCA_5F001956345.1_202017-01-18]
1,657 sequences; 26,990,446 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq326 183 1e-43
>seq326
Length=7170
Score = 183 bits (202), Expect = 1e-43
Identities = 233/329 (71%), Gaps = 55/329 (17%)
Strand=Plus/Minus
Query 410 CGTCTTG-GAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCC 468
|||||| | ||||||| |||||||||||| ||| ||||||| | || | ||||||||
Sbjct 6183 CGTCTTCTGGACACGGATCAAGGAGTCTAATATCGATGCGAGGGCTTATTTATCAAACCC 6124
Query 469 GTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCC 528
| ||| ||| ||||||||||||||| ||||| | |||| ||||||| |||||||||
Sbjct 6123 ATATGCGGAATAAAAGTGAACGGAGGTAGGAACACTCAAGGGCGCACCATTGACCGATCC 6064
Query 529 TGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAG---ATGGTG 585
|| || | |||||||||||||||| |||||||||| ||||||||||||| | | ||
Sbjct 6063 GGAAGTTTACGGATGGATTTGAGTATTAGCATAGCTGCTGGGACCCGAAAGGTAAGGATG 6004
Query 586 A---------ACTATGCCTG----------------------AATAGGGTGAA----GCC 610
| | | ||||| | | |||||| |||
Sbjct 6003 ATCCTTAATCCCAAGGCCTGGAGTCTCTGCTAACATATCAACCAGATGGTGAACTATGCC 5944
Query 611 AGA----------------GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAA 654
|| |||| ||||||||||||||||||||||||||| ||||||||
Sbjct 5943 TGAATCGGGTGAAGCCAGAGGAAGCTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAA 5884
Query 655 TCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||||||||||||||||||||||||||
Sbjct 5883 TCGATCGTCAAATTTGGGTATAGGGGCGA 5855
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079964457350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |