Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ramalina_20peruviana_20[genbank_20GCA_5F001956345.1_202017-01-18] 1,657 sequences; 26,990,446 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq894 75.2 2e-11 >seq894 Length=447130 Score = 75.2 bits (82), Expect = 2e-11 Identities = 97/132 (73%), Gaps = 4/132 (3%) Strand=Plus/Minus Query 173 CCGTCCTCGCCCCAACGGTAGG--CGCGGCTGCGTGCATGGTCATGGGGGAAGTAGGCCC 230 |||||||||||||||||||| | | || | | ||||| ||||||||||||| | || Sbjct 335301 CCGTCCTCGCCCCAACGGTAAGTCCTCGAC--CTAGCATGCTCATGGGGGAAGTGGCTCC 335244 Query 231 AGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCAGGT 290 | || || ||||| || |||||||| || || || |||| || | || ||||| | Sbjct 335243 ATGCATCACCATCCTCGGAATAGTCTTCTCGAACTGTAGCCCACTGCCTCTCACTCAGAT 335184 Query 291 AGGGGCCCCACT 302 | | ||||||| Sbjct 335183 ATGATCCCCACT 335172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007983297440