Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ramalina_20peruviana_20[genbank_20GCA_5F001956345.1_202017-01-18] 1,657 sequences; 26,990,446 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq331 102 3e-16 seq369 86.0 3e-11 >seq331 Length=328426 Score = 102 bits (112), Expect = 3e-16 Identities = 107/138 (78%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCG-C 449064 ||||||||||||||| || | ||||||||||||||||||||||| | | || || | | Sbjct 80197 GTCATGCGCGACGGGAAGCCGTGCGGGTTCATGATGATGTCGGG-GACCATCCCGCTGTC 80139 Query 449065 GTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCG 449124 | |||||||||||| | | | | |||| ||||| |||||||| ||||||||||| Sbjct 80138 GGAGAAGGGCATGTCGACTTGTTCGGCCACGAGGCCCACCACGCCCTTTTGGCCGTGGCG 80079 Query 449125 GCTGCAGAACTTGTCCCC 449142 | | |||| ||||| || Sbjct 80078 GGAGGAGAATTTGTCGCC 80061 >seq369 Length=6626 Score = 86.0 bits (94), Expect = 3e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 349079 AGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAG 349138 |||||||||||||| | ||||| ||||| || ||||| |||| | ||| || || || Sbjct 3650 AGAATCTCCTTGAGACGGGGCACACCCAGTGTGACGTTTTTGGATGAGACACCAGCGAAA 3591 Query 349139 TGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATG 349198 ||||| || | ||| |||| || || ||||| || || ||||| | ||||||| Sbjct 3590 TGGAAAGTGTTGAGTGTCATTTGTGTTGCTGGCTCACCAATCGACTGGGCTGCGAGGACA 3531 Query 349199 CCTACCATCTCGCCGGG 349215 || ||||| ||||| || Sbjct 3530 CCGACCATTTCGCCCGG 3514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084693860831286