Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02- 10] 36 sequences; 42,868,360 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq32 80.6 6e-13 seq30 80.6 6e-13 seq29 80.6 6e-13 seq28 80.6 6e-13 seq27 80.6 6e-13 seq10 80.6 6e-13 seq8 80.6 6e-13 seq31 78.8 2e-12 >seq32 Length=46443 Score = 80.6 bits (88), Expect = 6e-13 Identities = 106/146 (73%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||||| || | ||||||| |||||||| Sbjct 37981 ATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCGTTAC 38040 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||| ||| | | | | ||| | | ||||| ||||||||||||||||||| | | Sbjct 38041 ATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCA-C 38099 Query 129 GTTACGGCCGCCGTTTACTGGGGCTT 154 |||| ||||||| || || |||| || Sbjct 38100 GTTAAGGCCGCCATTAACCGGGGGTT 38125 >seq30 Length=31080 Score = 80.6 bits (88), Expect = 6e-13 Identities = 106/146 (73%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||||| || | ||||||| |||||||| Sbjct 19963 ATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCGTTAC 19904 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||| ||| | | | | ||| | | ||||| ||||||||||||||||||| | | Sbjct 19903 ATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCA-C 19845 Query 129 GTTACGGCCGCCGTTTACTGGGGCTT 154 |||| ||||||| || || |||| || Sbjct 19844 GTTAAGGCCGCCATTAACCGGGGGTT 19819 Score = 80.6 bits (88), Expect = 6e-13 Identities = 106/146 (73%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||||| || | ||||||| |||||||| Sbjct 22035 ATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCGTTAC 22094 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||| ||| | | | | ||| | | ||||| ||||||||||||||||||| | | Sbjct 22095 ATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCA-C 22153 Query 129 GTTACGGCCGCCGTTTACTGGGGCTT 154 |||| ||||||| || || |||| || Sbjct 22154 GTTAAGGCCGCCATTAACCGGGGGTT 22179 >seq29 Length=25365 Score = 80.6 bits (88), Expect = 6e-13 Identities = 106/146 (73%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||||| || | ||||||| |||||||| Sbjct 13932 ATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCGTTAC 13991 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||| ||| | | | | ||| | | ||||| ||||||||||||||||||| | | Sbjct 13992 ATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCA-C 14050 Query 129 GTTACGGCCGCCGTTTACTGGGGCTT 154 |||| ||||||| || || |||| || Sbjct 14051 GTTAAGGCCGCCATTAACCGGGGGTT 14076 Score = 78.8 bits (86), Expect = 2e-12 Identities = 104/143 (73%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||||| || | ||||||| |||||||| Sbjct 11012 ATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCGTTAC 10953 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||| ||| | | | | ||| | | ||||| ||||||||||||||||||| | | Sbjct 10952 ATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCA-C 10894 Query 129 GTTACGGCCGCCGTTTACTGGGG 151 |||| ||||||| || || |||| Sbjct 10893 GTTAAGGCCGCCATTAACCGGGG 10871 >seq28 Length=42739 Score = 80.6 bits (88), Expect = 6e-13 Identities = 106/146 (73%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||||| || | ||||||| |||||||| Sbjct 7865 ATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCGTTAC 7924 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||| ||| | | | | ||| | | ||||| ||||||||||||||||||| | | Sbjct 7925 ATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCA-C 7983 Query 129 GTTACGGCCGCCGTTTACTGGGGCTT 154 |||| ||||||| || || |||| || Sbjct 7984 GTTAAGGCCGCCATTAACCGGGGGTT 8009 Score = 80.6 bits (88), Expect = 6e-13 Identities = 106/146 (73%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||||| || | ||||||| |||||||| Sbjct 40704 ATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCGTTAC 40763 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||| ||| | | | | ||| | | ||||| ||||||||||||||||||| | | Sbjct 40764 ATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCA-C 40822 Query 129 GTTACGGCCGCCGTTTACTGGGGCTT 154 |||| ||||||| || || |||| || Sbjct 40823 GTTAAGGCCGCCATTAACCGGGGGTT 40848 >seq27 Length=46669 Score = 80.6 bits (88), Expect = 6e-13 Identities = 106/146 (73%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||||| || | ||||||| |||||||| Sbjct 23680 ATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCGTTAC 23739 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||| ||| | | | | ||| | | ||||| ||||||||||||||||||| | | Sbjct 23740 ATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCA-C 23798 Query 129 GTTACGGCCGCCGTTTACTGGGGCTT 154 |||| ||||||| || || |||| || Sbjct 23799 GTTAAGGCCGCCATTAACCGGGGGTT 23824 >seq10 Length=16617 Score = 80.6 bits (88), Expect = 6e-13 Identities = 106/146 (73%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||||| || | ||||||| |||||||| Sbjct 1999 ATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCGTTAC 2058 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||| ||| | | | | ||| | | ||||| ||||||||||||||||||| | | Sbjct 2059 ATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCA-C 2117 Query 129 GTTACGGCCGCCGTTTACTGGGGCTT 154 |||| ||||||| || || |||| || Sbjct 2118 GTTAAGGCCGCCATTAACCGGGGGTT 2143 Score = 80.6 bits (88), Expect = 6e-13 Identities = 106/146 (73%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||||| || | ||||||| |||||||| Sbjct 14087 ATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCGTTAC 14028 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||| ||| | | | | ||| | | ||||| ||||||||||||||||||| | | Sbjct 14027 ATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCA-C 13969 Query 129 GTTACGGCCGCCGTTTACTGGGGCTT 154 |||| ||||||| || || |||| || Sbjct 13968 GTTAAGGCCGCCATTAACCGGGGGTT 13943 >seq8 Length=42460 Score = 80.6 bits (88), Expect = 6e-13 Identities = 106/146 (73%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||||| || | ||||||| |||||||| Sbjct 5243 ATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCGTTAC 5184 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||| ||| | | | | ||| | | ||||| ||||||||||||||||||| | | Sbjct 5183 ATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCA-C 5125 Query 129 GTTACGGCCGCCGTTTACTGGGGCTT 154 |||| ||||||| || || |||| || Sbjct 5124 GTTAAGGCCGCCATTAACCGGGGGTT 5099 Score = 80.6 bits (88), Expect = 6e-13 Identities = 106/146 (73%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||||| || | ||||||| |||||||| Sbjct 15671 ATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCGTTAC 15730 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||| ||| | | | | ||| | | ||||| ||||||||||||||||||| | | Sbjct 15731 ATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCA-C 15789 Query 129 GTTACGGCCGCCGTTTACTGGGGCTT 154 |||| ||||||| || || |||| || Sbjct 15790 GTTAAGGCCGCCATTAACCGGGGGTT 15815 >seq31 Length=16752 Score = 78.8 bits (86), Expect = 2e-12 Identities = 104/143 (73%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||||| || | ||||||| |||||||| Sbjct 6391 ATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCGTTAC 6332 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||| ||| | | | | ||| | | ||||| ||||||||||||||||||| | | Sbjct 6331 ATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCA-C 6273 Query 129 GTTACGGCCGCCGTTTACTGGGG 151 |||| ||||||| || || |||| Sbjct 6272 GTTAAGGCCGCCATTAACCGGGG 6250 Score = 78.8 bits (86), Expect = 2e-12 Identities = 104/143 (73%), Gaps = 1/143 (1%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||||| || | ||||||| |||||||| Sbjct 8704 ATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCGTTAC 8763 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||| ||| | | | | ||| | | ||||| ||||||||||||||||||| | | Sbjct 8764 ATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCA-C 8822 Query 129 GTTACGGCCGCCGTTTACTGGGG 151 |||| ||||||| || || |||| Sbjct 8823 GTTAAGGCCGCCATTAACCGGGG 8845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062399617536