Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02- 10] 36 sequences; 42,868,360 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq24 96.9 2e-18 seq23 96.9 2e-18 seq22 96.9 2e-18 seq21 96.9 2e-18 seq20 96.9 2e-18 seq19 96.9 2e-18 seq17 96.9 2e-18 seq7 96.9 2e-18 >seq24 Length=24636 Score = 96.9 bits (106), Expect = 2e-18 Identities = 75/84 (89%), Gaps = 4/84 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 3026 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 2970 Query 99 GGCAGGGACGTAATACAACGCAAG 122 |||||||||||||| ||||||||| Sbjct 2969 GGCAGGGACGTAAT-CAACGCAAG 2947 Score = 96.9 bits (106), Expect = 2e-18 Identities = 75/84 (89%), Gaps = 4/84 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 11544 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 11488 Query 99 GGCAGGGACGTAATACAACGCAAG 122 |||||||||||||| ||||||||| Sbjct 11487 GGCAGGGACGTAAT-CAACGCAAG 11465 Score = 96.9 bits (106), Expect = 2e-18 Identities = 75/84 (89%), Gaps = 4/84 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 20062 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 20006 Query 99 GGCAGGGACGTAATACAACGCAAG 122 |||||||||||||| ||||||||| Sbjct 20005 GGCAGGGACGTAAT-CAACGCAAG 19983 >seq23 Length=28992 Score = 96.9 bits (106), Expect = 2e-18 Identities = 75/84 (89%), Gaps = 4/84 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 4308 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 4252 Query 99 GGCAGGGACGTAATACAACGCAAG 122 |||||||||||||| ||||||||| Sbjct 4251 GGCAGGGACGTAAT-CAACGCAAG 4229 Score = 96.9 bits (106), Expect = 2e-18 Identities = 75/84 (89%), Gaps = 4/84 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 12818 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 12762 Query 99 GGCAGGGACGTAATACAACGCAAG 122 |||||||||||||| ||||||||| Sbjct 12761 GGCAGGGACGTAAT-CAACGCAAG 12739 Score = 96.9 bits (106), Expect = 2e-18 Identities = 75/84 (89%), Gaps = 4/84 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 21337 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 21281 Query 99 GGCAGGGACGTAATACAACGCAAG 122 |||||||||||||| ||||||||| Sbjct 21280 GGCAGGGACGTAAT-CAACGCAAG 21258 >seq22 Length=27813 Score = 96.9 bits (106), Expect = 2e-18 Identities = 75/84 (89%), Gaps = 4/84 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 3530 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 3586 Query 99 GGCAGGGACGTAATACAACGCAAG 122 |||||||||||||| ||||||||| Sbjct 3587 GGCAGGGACGTAAT-CAACGCAAG 3609 Score = 96.9 bits (106), Expect = 2e-18 Identities = 75/84 (89%), Gaps = 4/84 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 15318 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 15262 Query 99 GGCAGGGACGTAATACAACGCAAG 122 |||||||||||||| ||||||||| Sbjct 15261 GGCAGGGACGTAAT-CAACGCAAG 15239 Score = 96.9 bits (106), Expect = 2e-18 Identities = 75/84 (89%), Gaps = 4/84 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 23833 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 23777 Query 99 GGCAGGGACGTAATACAACGCAAG 122 |||||||||||||| ||||||||| Sbjct 23776 GGCAGGGACGTAAT-CAACGCAAG 23754 >seq21 Length=35818 Score = 96.9 bits (106), Expect = 2e-18 Identities = 75/84 (89%), Gaps = 4/84 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 2392 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 2336 Query 99 GGCAGGGACGTAATACAACGCAAG 122 |||||||||||||| ||||||||| Sbjct 2335 GGCAGGGACGTAAT-CAACGCAAG 2313 Score = 96.9 bits (106), Expect = 2e-18 Identities = 75/84 (89%), Gaps = 4/84 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 10911 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 10855 Query 99 GGCAGGGACGTAATACAACGCAAG 122 |||||||||||||| ||||||||| Sbjct 10854 GGCAGGGACGTAAT-CAACGCAAG 10832 Score = 96.9 bits (106), Expect = 2e-18 Identities = 75/84 (89%), Gaps = 4/84 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 19431 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 19375 Query 99 GGCAGGGACGTAATACAACGCAAG 122 |||||||||||||| ||||||||| Sbjct 19374 GGCAGGGACGTAAT-CAACGCAAG 19352 Score = 96.9 bits (106), Expect = 2e-18 Identities = 75/84 (89%), Gaps = 4/84 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 27951 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 27895 Query 99 GGCAGGGACGTAATACAACGCAAG 122 |||||||||||||| ||||||||| Sbjct 27894 GGCAGGGACGTAAT-CAACGCAAG 27872 >seq20 Length=21278 Score = 96.9 bits (106), Expect = 2e-18 Identities = 75/84 (89%), Gaps = 4/84 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 7360 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 7416 Query 99 GGCAGGGACGTAATACAACGCAAG 122 |||||||||||||| ||||||||| Sbjct 7417 GGCAGGGACGTAAT-CAACGCAAG 7439 Score = 96.9 bits (106), Expect = 2e-18 Identities = 75/84 (89%), Gaps = 4/84 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 13249 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 13193 Query 99 GGCAGGGACGTAATACAACGCAAG 122 |||||||||||||| ||||||||| Sbjct 13192 GGCAGGGACGTAAT-CAACGCAAG 13170 >seq19 Length=24101 Score = 96.9 bits (106), Expect = 2e-18 Identities = 75/84 (89%), Gaps = 4/84 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 3590 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 3534 Query 99 GGCAGGGACGTAATACAACGCAAG 122 |||||||||||||| ||||||||| Sbjct 3533 GGCAGGGACGTAAT-CAACGCAAG 3511 Score = 96.9 bits (106), Expect = 2e-18 Identities = 75/84 (89%), Gaps = 4/84 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 12110 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 12054 Query 99 GGCAGGGACGTAATACAACGCAAG 122 |||||||||||||| ||||||||| Sbjct 12053 GGCAGGGACGTAAT-CAACGCAAG 12031 Score = 96.9 bits (106), Expect = 2e-18 Identities = 75/84 (89%), Gaps = 4/84 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 15236 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 15292 Query 99 GGCAGGGACGTAATACAACGCAAG 122 |||||||||||||| ||||||||| Sbjct 15293 GGCAGGGACGTAAT-CAACGCAAG 15315 Score = 96.9 bits (106), Expect = 2e-18 Identities = 75/84 (89%), Gaps = 4/84 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 23756 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 23812 Query 99 GGCAGGGACGTAATACAACGCAAG 122 |||||||||||||| ||||||||| Sbjct 23813 GGCAGGGACGTAAT-CAACGCAAG 23835 >seq17 Length=2260672 Score = 96.9 bits (106), Expect = 2e-18 Identities = 75/84 (89%), Gaps = 4/84 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 2258344 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 2258288 Query 99 GGCAGGGACGTAATACAACGCAAG 122 |||||||||||||| ||||||||| Sbjct 2258287 GGCAGGGACGTAAT-CAACGCAAG 2258265 >seq7 Length=32167 Score = 96.9 bits (106), Expect = 2e-18 Identities = 75/84 (89%), Gaps = 4/84 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 7733 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 7677 Query 99 GGCAGGGACGTAATACAACGCAAG 122 |||||||||||||| ||||||||| Sbjct 7676 GGCAGGGACGTAAT-CAACGCAAG 7654 Score = 96.9 bits (106), Expect = 2e-18 Identities = 75/84 (89%), Gaps = 4/84 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 24700 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 24644 Query 99 GGCAGGGACGTAATACAACGCAAG 122 |||||||||||||| ||||||||| Sbjct 24643 GGCAGGGACGTAAT-CAACGCAAG 24621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300799898480