Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq304 479 5e-133 >seq304 Length=27364 Score = 479 bits (530), Expect = 5e-133 Identities = 295/311 (95%), Gaps = 3/311 (1%) Strand=Plus/Plus Query 10 CGGCCGGGCCTTTC-CTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGG-AGCC 67 ||| |||| |||| |||||||||| || |||||||||||||||||||| ||||| | || Sbjct 19939 CGGTCGGGTCTTTTTCTTCTGGGGAGCCCCATGCCCTTCACTGGGTGTGGCGGGGGAACC 19998 Query 68 AGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAG 127 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 19999 AGGACTTTTACCTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAG 20058 Query 128 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAAT 187 ||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct 20059 CATGGAATAATAGAATAGGACAT-CGGTTCTATTTTGTTGGTTTCTAGGACCGCTGTAAT 20117 Query 188 GATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 20118 GATTAATAGGGATAGTCGGGGGCGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 20177 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct 20178 TATTGAAGACTAACTACTGCGAAAGCATTCGCCAAGGATGTTTTCATTAATCAGTGAACG 20237 Query 308 AAAGTTAGGGG 318 ||||||||||| Sbjct 20238 AAAGTTAGGGG 20248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915191827264