Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq341 141 2e-31 >seq341 Length=23579 Score = 141 bits (156), Expect = 2e-31 Identities = 193/268 (72%), Gaps = 5/268 (2%) Strand=Plus/Plus Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74 |||| ||| || ||| ||||||||||||||| | |||||||| |||||||| Sbjct 20488 ATCTGCACTGCTATTCCAATTTCACTGAGTCAATCATCGAGACAGCTGTTGTATCGTTAC 20547 Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134 ||||| |||| | | | | ||| | | || || ||| ||||||||||||||| | || Sbjct 20548 ATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGACCCTCATC 20607 Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTT----AGCTAACCCCA 190 | || |||||||||||| ||||| ||| |||| | | | || || | |||| | Sbjct 20608 GGTAAGGCCGCCGTTTATCGGGGTTTCCTTCAA-AACCTAGCTTTTTAAAACTAAATAGA 20666 Query 191 TCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGC 250 || ||| ||| ||| ||| |||||| | |||||| |||| || | ||| | || || Sbjct 20667 TCTGTTACCCTGCCGACACGGGGCAGACATCACACTTAATACATCGATTTTTATCTTAGC 20726 Query 251 AGAGTGCTGTGTTTTTAATAAACAGTCG 278 | |||||| |||||| | |||||||||| Sbjct 20727 AAAGTGCTCTGTTTTAACTAAACAGTCG 20754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260788741056