Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq304 379 7e-103
>seq304
Length=27364
Score = 379 bits (420), Expect = 7e-103
Identities = 259/291 (89%), Gaps = 3/291 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 26117 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 26058
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 26057 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 25998
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
|||| | | ||||||||||||||||| ||| |||| || ||||||||||||||||||
Sbjct 25997 GGCCAGTATATGACCTTAACGCCAGAAATTGGGCGGTAAAACCCAGTTCCGCTTCATTGA 25938
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||||||||||||||||||||||||| || ||| ||||||| ||
Sbjct 25937 ATAAGTAAAAAAACGATAAGGGTAGTGGTATTTCAC---CGGCGATTGCTCTCCCACCTA 25881
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
||||||||| | | ||| |||||||| ||| ||||||||||||||||||
Sbjct 25880 TTCTACACCCCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAAC 25830
Score = 257 bits (284), Expect = 5e-66
Identities = 144/145 (99%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 25450 CAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 25391
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 25390 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 25331
Query 417 ACGAGGCATTTGGCTACCTTAAGAG 441
|||||||||||||||||||||||||
Sbjct 25330 ACGAGGCATTTGGCTACCTTAAGAG 25306
Score = 159 bits (176), Expect = 1e-36
Identities = 97/103 (94%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500
|||||||||||||||||||||||||||||||||| | |||||||||| || ||||||||
Sbjct 24932 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTATTCGAATTTCTTCGCTGTGACATTC 24873
Query 501 AGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
||||||||||||||||||||||||||||||||| |||||||||
Sbjct 24872 AGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 24830
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635185397664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |