Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq304 379 7e-103 >seq304 Length=27364 Score = 379 bits (420), Expect = 7e-103 Identities = 259/291 (89%), Gaps = 3/291 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 26117 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 26058 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 26057 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 25998 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 |||| | | ||||||||||||||||| ||| |||| || |||||||||||||||||| Sbjct 25997 GGCCAGTATATGACCTTAACGCCAGAAATTGGGCGGTAAAACCCAGTTCCGCTTCATTGA 25938 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||||||||||||||||||||||||| || ||| ||||||| || Sbjct 25937 ATAAGTAAAAAAACGATAAGGGTAGTGGTATTTCAC---CGGCGATTGCTCTCCCACCTA 25881 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 ||||||||| | | ||| |||||||| ||| |||||||||||||||||| Sbjct 25880 TTCTACACCCCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAAC 25830 Score = 257 bits (284), Expect = 5e-66 Identities = 144/145 (99%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 25450 CAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 25391 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 25390 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 25331 Query 417 ACGAGGCATTTGGCTACCTTAAGAG 441 ||||||||||||||||||||||||| Sbjct 25330 ACGAGGCATTTGGCTACCTTAAGAG 25306 Score = 159 bits (176), Expect = 1e-36 Identities = 97/103 (94%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500 |||||||||||||||||||||||||||||||||| | |||||||||| || |||||||| Sbjct 24932 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTATTCGAATTTCTTCGCTGTGACATTC 24873 Query 501 AGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||| ||||||||| Sbjct 24872 AGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 24830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635185397664