Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq304 178 2e-42 >seq304 Length=27364 Score = 178 bits (196), Expect = 2e-42 Identities = 144/170 (85%), Gaps = 7/170 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||| |||||||||||| || Sbjct 27187 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCGGTCTGACCAGGCGGT 27244 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| || ||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 27245 GCCGCGACGCCACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 27304 Query 121 GAACGGGGTGAT---TCTCTCCTGCACATCGTAGTCGGATACGAATAGGC 167 | | ||| || | | || || | ||||||||||||||| |||||| Sbjct 27305 G--CCGGGACATCGGGCGCCCCCGCGCGTCGTAGTCGGATACGCATAGGC 27352 Score = 113 bits (124), Expect = 7e-23 Identities = 96/117 (82%), Gaps = 5/117 (4%) Strand=Plus/Plus Query 54 AGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 |||| ||||||||| || ||||||||| |||||||||||||||||||||||||||||||| Sbjct 17260 AGGCGGTGCCGCGACGCCACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATC 17319 Query 114 CATGCCAGAACGGGGTGAT---TCTCTCCTGCACATCGTAGTCGGATACGAATAGGC 167 | |||| | | ||| || | | || || | ||||||||||||||| |||||| Sbjct 17320 CGTGCCGG--CCGGGACATCGGGCGCCCCCGCGCGTCGTAGTCGGATACGCATAGGC 17374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819192913152