Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq304 178 2e-42
>seq304
Length=27364
Score = 178 bits (196), Expect = 2e-42
Identities = 144/170 (85%), Gaps = 7/170 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||||| ||||||||||||||||| |||||||||||| ||
Sbjct 27187 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCGGTCTGACCAGGCGGT 27244
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| || ||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 27245 GCCGCGACGCCACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 27304
Query 121 GAACGGGGTGAT---TCTCTCCTGCACATCGTAGTCGGATACGAATAGGC 167
| | ||| || | | || || | ||||||||||||||| ||||||
Sbjct 27305 G--CCGGGACATCGGGCGCCCCCGCGCGTCGTAGTCGGATACGCATAGGC 27352
Score = 113 bits (124), Expect = 7e-23
Identities = 96/117 (82%), Gaps = 5/117 (4%)
Strand=Plus/Plus
Query 54 AGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|||| ||||||||| || ||||||||| ||||||||||||||||||||||||||||||||
Sbjct 17260 AGGCGGTGCCGCGACGCCACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATC 17319
Query 114 CATGCCAGAACGGGGTGAT---TCTCTCCTGCACATCGTAGTCGGATACGAATAGGC 167
| |||| | | ||| || | | || || | ||||||||||||||| ||||||
Sbjct 17320 CGTGCCGG--CCGGGACATCGGGCGCCCCCGCGCGTCGTAGTCGGATACGCATAGGC 17374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819192913152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |