Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq304 814 0.0 >seq304 Length=27364 Score = 814 bits (902), Expect = 0.0 Identities = 485/505 (96%), Gaps = 3/505 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||| Sbjct 19777 GTACTCATTCCAATTACGAGACCCGAAAGAGCCCCGTATCAGTATTTATTGTCACTACCT 19718 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 19717 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 19658 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||| ||||||||||||||||||||||||| | ||||| ||| Sbjct 19657 TCTCAGGCTCCCTCTCCGGAATAGAACCCTAATTCCCCGTTACCCGTTAAGACCATTGTA 19598 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 19597 GGCCACTATCCTACAATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 19538 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCC-CGAAGGGCGTTGG 299 |||||||||||||||||| |||||||||||||||||||| ||||| |||||||| |||| Sbjct 19537 CAAGGCCATGCGATTCGTGAAGTTATTATGAATCACCAAAAAGCCCACGAAGGGCATTGG 19478 Query 300 TTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 19477 TTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTTGCATGTATTAGCTCTA 19418 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 19417 GAATTACCACGGTTATCCAGGTA--AAGGTACTATCAAATAAACGATAACTGATTTAATG 19360 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct 19359 AGCCATTCGCAGTTTCACCGTATAGTTTGCTTATACTTAGACATGCATGGCTTAATCTTT 19300 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 19299 GAGACAAGCATATGACTACTGGCAG 19275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510386512128