Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq292 233 2e-56
seq201 82.4 6e-11
>seq292
Length=28646
Score = 233 bits (258), Expect = 2e-56
Identities = 584/875 (67%), Gaps = 14/875 (2%)
Strand=Plus/Plus
Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061
||||| || ||||| ||||| ||||||||||| ||||| || || || | |||||||||
Sbjct 10831 GGAAGAGCCAGAGAGGCGAGATTGCAGACAGCGATCTCATCTGGGGCACTGTACTCGACA 10890
Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121
||||| ||||||||||| || || || || |||| |||| || || |||||
Sbjct 10891 ATTTCCGTGCACAGATTGGAGCTCCGGATTGTCCCCAGGTTCTTCTGGTTGCTCTTCTTG 10950
Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181
||||| ||||||||||| | ||| || ||||| || ||||| || | || | |||
Sbjct 10951 TTGCAGGCATCCTTGTAAAGCATATAAGGAGTCCCAGTCTCGGTCTGTGCTTCTAGGATC 11010
Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGT---ACGTACCGCCCTACCT-TTGCGTTCGTA 66237
|| | ||| | | ||||| ||||| ||| ||| | | ||| || | || ||
Sbjct 11011 GCATACCACAACTTCTGGGCCTTGACCGTCTGACG-ACCTCG-TCCCTCTTTC--TCATA 11066
Query 66238 ATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTG 66297
||||| |||||| ||||| || || | || || | || | || || ||
Sbjct 11067 CTGTTCATAGAGGGCATCGAATTCCTCGCCATAGACATCAGCAAGGCCCGGTGCCTCATG 11126
Query 66298 TGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTAT 66357
||||| | ||| | ||| || | || || ||||| | ||| |||||||| || |
Sbjct 11127 AGGACAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACGTCTCATGAATAGATCCGGAGT 11186
Query 66358 CCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAA 66417
||| || || || || | || || || || ||| || | ||||| || || | ||
Sbjct 11187 CCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCTTTCCGTGGTTCTTTCTCAG 11246
Query 66418 GTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCAT 66477
|| || | || |||| || || |||||||| ||||| |||||||| || | ||
Sbjct 11247 GTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACCGGG 11306
Query 66478 ACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGG 66537
||| || |||||| ||||| || || || || |||||||||||||| | ||| ||
Sbjct 11307 ACGCTTATTGCCACCCTGGTCCACATAACGGGCAGTGTTGTTGAAGACACGAAGCATGGG 11366
Query 66538 TACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATC 66597
| ||| || || || |||| ||||| ||| | || ||| || || || ||
Sbjct 11367 AATGAGACCATTGGAAGTGCCGTTGGTCCCGGCAATATAGGAACCAGTAGCACGAATGCA 11426
Query 66598 GTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACT 66655
||| | || || |||||||| || || ||||| ||||| ||||||| || | | |
Sbjct 11427 ATGAGCGTTGAGGCCAATACCGCCAGCAGTCTTGGAGATCATAGCACAAGTCTTGAGAGT 11486
Query 66656 GTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGT 66715
||| | | || || |||||| ||| | || ||| | | | ||||||| | |
Sbjct 11487 GTC--GTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAAGCATGAGGACAAT 11544
Query 66716 TGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGA 66775
|| |||| || ||| |||| ||| || || || | ||||| || ||| | | |
Sbjct 11545 TGAGGTTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGTGAAGCACTTCTGG 11604
Query 66776 GACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-C 66834
|||||| ||||| ||||| || | || |||| || ||||| || || | || |
Sbjct 11605 GACATGAGGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCCATGGATGCCAACTGCC 11664
Query 66835 ACATCGCATCAGGAGGTATTGAGGCCGTTCGACCA 66869
||| ||||| || | || ||| || | ||| |||
Sbjct 11665 ACA-CGCATGAGCATGTGTTGCGGTCTCTCGGCCA 11698
Score = 87.8 bits (96), Expect = 1e-12
Identities = 92/121 (76%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 65421 GATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGG 65480
|||||| ||||||||| || || | || ||||||||| ||||||||||||||| |
Sbjct 10268 GATTGACGACTTGGAATTCACCAGCCAACACACGACGGGAGTAGATGTTGGACGTGTATG 10327
Query 65481 GTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGA 65540
| || ||| |||| ||||||| | ||||| | || |||||||| ||||| || || |
Sbjct 10328 GCTCGAAGCATTCGTTGTTGCCCAAGATTTGAGAGGTGGATGCAGTAGGCATAGGGGCAA 10387
Query 65541 C 65541
|
Sbjct 10388 C 10388
>seq201
Length=168916
Score = 82.4 bits (90), Expect = 6e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 61717 ATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGA 61776
||||| |||||||| |||| || |||||||| ||| | || | |||||||| |
Sbjct 77866 ATCGAGAAGGAATTTTTGACAGATGCTTTGCCTGTCGCTCTGCTTGGCATGAACGCCAAA 77807
Query 61777 CTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAG 61836
|| ||| || |||||||| || |||||||||||||| | | | | || | |||
Sbjct 77806 CTGATGCAACAATATATTGAGTTCGTTGCCGACCGTCTTCTCCTTGCCCTCGGAAACAAG 77747
Query 61837 CGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAG 61896
| ||| ||| | | || || || || ||||||| || || ||| || |||
Sbjct 77746 AAGTACTACAATGCCCAGAATCCTTTCAGCTTTATGGACAACATCTCATTGGCGGGAAAG 77687
Query 61897 ACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931
|| || || |||||||| ||||| || || || ||
Sbjct 77686 ACAAACTTCTTCGAGAAGCGTGTCGGTGATTACCA 77652
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397563673093520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |