Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq1098 253 3e-65
seq909 248 1e-63
>seq1098
Length=7876
Score = 253 bits (280), Expect = 3e-65
Identities = 196/229 (86%), Gaps = 3/229 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| || | |||||| ||||||||| || ||||||| ||| |
Sbjct 4843 GTACAAAGGGCAGGGACGTAATCGGCACGAGCT-GATGACTCGTGCCTACTAGGCATT-C 4900
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| ||| | ||||||
Sbjct 4901 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGGGTTTAACAAGATT 4960
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||||||| |||||||||||||| ||||| || |||||||||||||||||||
Sbjct 4961 ACCCGGACCTCTCGGCCAAGGTGATGTACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCG 5020
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 5021 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCGCGCACTTCC 5069
>seq909
Length=27335
Score = 248 bits (274), Expect = 1e-63
Identities = 181/206 (88%), Gaps = 3/206 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 5897 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGCATT-C 5954
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| ||||||
Sbjct 5955 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 6014
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| ||||| |||||||||||||| ||||| || | |||||||||||||||||||
Sbjct 6015 ACCCAGACCTTTCGGCCAAGGTGATGTACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 6074
Query 180 GCCCAGAACATCTAAGGGCATCACAG 205
||||||||||||||||||||||||||
Sbjct 6075 GCCCAGAACATCTAAGGGCATCACAG 6100
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751989254625
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |