Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1098 482 4e-134 seq909 479 5e-133 >seq1098 Length=7876 Score = 482 bits (534), Expect = 4e-134 Identities = 296/314 (94%), Gaps = 1/314 (0%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||| || |||||||||||||||| || |||| |||||||||| |||| ||||| Sbjct 5800 TGGTCCGGCTGGACCTTTCCTTCTGGGGAACCTCATGGCCTTCACTGGCTGTGG-GGGGA 5742 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 5741 ACCAGGACTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 5682 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5681 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 5622 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct 5621 AATGATTAATAGGGATAGTCGGGGGCGTCAGTATTCAGCTGTCAGAGGTGAAATTCTTGG 5562 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 |||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||| || Sbjct 5561 ATTTGCTGAAGACTAACTACTGCGAAAGCATTCGCCAAGGATGTTTTCATTAATCAGGGA 5502 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 5501 ACGAAAGTTAGGGG 5488 >seq909 Length=27335 Score = 479 bits (530), Expect = 5e-133 Identities = 295/311 (95%), Gaps = 3/311 (1%) Strand=Plus/Minus Query 10 CGGCCGGGCCTTTC-CTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGG-AGCC 67 ||| |||| |||| |||||||||| || |||||||||||||||||||| ||||| | || Sbjct 7423 CGGTCGGGTCTTTTTCTTCTGGGGAGCCCCATGCCCTTCACTGGGTGTGGCGGGGGAACC 7364 Query 68 AGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAG 127 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7363 AGGACTTTTACCTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAG 7304 Query 128 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAAT 187 ||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct 7303 CATGGAATAATAGAATAGGACAT-CGGTTCTATTTTGTTGGTTTCTAGGACCGCTGTAAT 7245 Query 188 GATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 7244 GATTAATAGGGATAGTCGGGGGCGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 7185 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct 7184 TATTGAAGACTAACTACTGCGAAAGCATTCGCCAAGGATGTTTTCATTAATCAGTGAACG 7125 Query 308 AAAGTTAGGGG 318 ||||||||||| Sbjct 7124 AAAGTTAGGGG 7114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915186500800