Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq996 82.4 1e-13
seq885 77.0 5e-12
>seq996
Length=16379
Score = 82.4 bits (90), Expect = 1e-13
Identities = 71/87 (82%), Gaps = 1/87 (1%)
Strand=Plus/Plus
Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198
|||| | |||| |||||||||||||| | || |||||||| |||||||| | |||||
Sbjct 1265 TGGCCCTCCTTATCCCGAAGTTACGGTAGTCAATTTGCCGAGTTCCTTAATGATTGTTCA 1324
Query 199 CCCGAACGCCTTAGTATTCTCTACCTG 225
| | |||||||| ||||||||||| ||
Sbjct 1325 CTCAAACGCCTTTGTATTCTCTACTTG 1351
>seq885
Length=30348
Score = 77.0 bits (84), Expect = 5e-12
Identities = 68/84 (81%), Gaps = 1/84 (1%)
Strand=Plus/Plus
Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198
|||| | |||| ||||||||||||| | | || |||||||| |||||||| | ||| |
Sbjct 18183 TGGCTCACCTTATCCCGAAGTTACGTGAGTCAATTTGCCGAGTTCCTTAATGATTGTTTA 18242
Query 199 CCCGAACGCCTTAGTATTCTCTAC 222
| | |||||||| |||||||||||
Sbjct 18243 CTCAAACGCCTTCGTATTCTCTAC 18266
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694390077675
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |