Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq996 82.4 1e-13 seq885 77.0 5e-12 >seq996 Length=16379 Score = 82.4 bits (90), Expect = 1e-13 Identities = 71/87 (82%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198 |||| | |||| |||||||||||||| | || |||||||| |||||||| | ||||| Sbjct 1265 TGGCCCTCCTTATCCCGAAGTTACGGTAGTCAATTTGCCGAGTTCCTTAATGATTGTTCA 1324 Query 199 CCCGAACGCCTTAGTATTCTCTACCTG 225 | | |||||||| ||||||||||| || Sbjct 1325 CTCAAACGCCTTTGTATTCTCTACTTG 1351 >seq885 Length=30348 Score = 77.0 bits (84), Expect = 5e-12 Identities = 68/84 (81%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198 |||| | |||| ||||||||||||| | | || |||||||| |||||||| | ||| | Sbjct 18183 TGGCTCACCTTATCCCGAAGTTACGTGAGTCAATTTGCCGAGTTCCTTAATGATTGTTTA 18242 Query 199 CCCGAACGCCTTAGTATTCTCTAC 222 | | |||||||| ||||||||||| Sbjct 18243 CTCAAACGCCTTCGTATTCTCTAC 18266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694390077675