Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq885 141 2e-31
seq996 131 4e-28
>seq885
Length=30348
Score = 141 bits (156), Expect = 2e-31
Identities = 193/268 (72%), Gaps = 5/268 (2%)
Strand=Plus/Plus
Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74
|||| ||| || ||| ||||||||||||||| | |||||||| ||||||||
Sbjct 17843 ATCTGCACTGCTATTCCAATTTCACTGAGTCAATCATCGAGACAGCTGTTGTATCGTTAC 17902
Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134
||||| |||| | | | | ||| | | || || ||| ||||||||||||||| | ||
Sbjct 17903 ATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGACCCTCATC 17962
Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTT----AGCTAACCCCA 190
| || |||||||||||| ||||| ||| |||| | | | || || | |||| |
Sbjct 17963 GGTAAGGCCGCCGTTTATCGGGGTTTCCTTCAA-AACCTAGCTTTTTAAAACTAAATAGA 18021
Query 191 TCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGC 250
|| ||| ||| ||| ||| |||||| | |||||| |||| || | ||| | || ||
Sbjct 18022 TCTGTTACCCTGCCGACACGGGGCAGACATCACACTTAATACATCGATTTTTATCTTAGC 18081
Query 251 AGAGTGCTGTGTTTTTAATAAACAGTCG 278
| |||||| |||||| | ||||||||||
Sbjct 18082 AAAGTGCTCTGTTTTAACTAAACAGTCG 18109
>seq996
Length=16379
Score = 131 bits (144), Expect = 4e-28
Identities = 199/279 (71%), Gaps = 11/279 (4%)
Strand=Plus/Plus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| || | |||| ||| || ||| ||||||||||||| | | ||||||||
Sbjct 915 TAAACAGTATCTGCACTGCTATTCCAATTTCACTGAGACAATCATCGAGACAGCTGTTGT 974
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||||||| | ||||| ||| || | | | ||| | | ||||| |||||||||||||||||
Sbjct 975 ATCGTTAAGTCATTCATGCTGGACCGCATTTAACGGCCAAGGTATTTCGCTACCTTAGGA 1034
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186
|| | || | || ||||||| |||| ||||| || |||| | || |||| ||
Sbjct 1035 CCCTCATAGGTAAGGCCGCCATTTATCGGGGTGTCCTTCAAAACCT--CAGTTA--AAAA 1090
Query 187 CCCA--TCAA----TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CT 239
|| | | || ||| || ||| || |||||| | |||||| | |||| | | |
Sbjct 1091 CCAAGGTAAATTCGTTACCCAGCCGACATTGGGCAGACATCACACTCAATACTTTGATAT 1150
Query 240 TTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
|| | |||||||||||||||||||||| ||||||||||
Sbjct 1151 TTTATCTTTGCAGAGTGCTGTGTTTTTATTAAACAGTCG 1189
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260781403200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |