Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq885 141 2e-31 seq996 131 4e-28 >seq885 Length=30348 Score = 141 bits (156), Expect = 2e-31 Identities = 193/268 (72%), Gaps = 5/268 (2%) Strand=Plus/Plus Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74 |||| ||| || ||| ||||||||||||||| | |||||||| |||||||| Sbjct 17843 ATCTGCACTGCTATTCCAATTTCACTGAGTCAATCATCGAGACAGCTGTTGTATCGTTAC 17902 Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134 ||||| |||| | | | | ||| | | || || ||| ||||||||||||||| | || Sbjct 17903 ATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGACCCTCATC 17962 Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTT----AGCTAACCCCA 190 | || |||||||||||| ||||| ||| |||| | | | || || | |||| | Sbjct 17963 GGTAAGGCCGCCGTTTATCGGGGTTTCCTTCAA-AACCTAGCTTTTTAAAACTAAATAGA 18021 Query 191 TCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGC 250 || ||| ||| ||| ||| |||||| | |||||| |||| || | ||| | || || Sbjct 18022 TCTGTTACCCTGCCGACACGGGGCAGACATCACACTTAATACATCGATTTTTATCTTAGC 18081 Query 251 AGAGTGCTGTGTTTTTAATAAACAGTCG 278 | |||||| |||||| | |||||||||| Sbjct 18082 AAAGTGCTCTGTTTTAACTAAACAGTCG 18109 >seq996 Length=16379 Score = 131 bits (144), Expect = 4e-28 Identities = 199/279 (71%), Gaps = 11/279 (4%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || || | |||| ||| || ||| ||||||||||||| | | |||||||| Sbjct 915 TAAACAGTATCTGCACTGCTATTCCAATTTCACTGAGACAATCATCGAGACAGCTGTTGT 974 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| | ||||| ||| || | | | ||| | | ||||| ||||||||||||||||| Sbjct 975 ATCGTTAAGTCATTCATGCTGGACCGCATTTAACGGCCAAGGTATTTCGCTACCTTAGGA 1034 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186 || | || | || ||||||| |||| ||||| || |||| | || |||| || Sbjct 1035 CCCTCATAGGTAAGGCCGCCATTTATCGGGGTGTCCTTCAAAACCT--CAGTTA--AAAA 1090 Query 187 CCCA--TCAA----TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CT 239 || | | || ||| || ||| || |||||| | |||||| | |||| | | | Sbjct 1091 CCAAGGTAAATTCGTTACCCAGCCGACATTGGGCAGACATCACACTCAATACTTTGATAT 1150 Query 240 TTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 || | |||||||||||||||||||||| |||||||||| Sbjct 1151 TTTATCTTTGCAGAGTGCTGTGTTTTTATTAAACAGTCG 1189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260781403200