Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq996 87.8 4e-15 seq885 80.6 6e-13 >seq996 Length=16379 Score = 87.8 bits (96), Expect = 4e-15 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||| | || | ||||||| ||||||| Sbjct 923 ATCTGCACTGCTATTCCAATTTCACTGAGACAATCATCGAGACAGCTGTTGTATCGTTAA 982 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | | ||| ||| || | | | ||| | | ||||| ||||||||||||||||||| | ||| Sbjct 983 GTCATTCATGCTGGACCGCATTTAACGGCCAAGGTATTTCGCTACCTTAGGACCCTCATA 1042 Query 129 GTTACGGCCGCCGTTTACTGGGG 151 | || ||||||| |||| |||| Sbjct 1043 GGTAAGGCCGCCATTTATCGGGG 1065 >seq885 Length=30348 Score = 80.6 bits (88), Expect = 6e-13 Identities = 184/270 (68%), Gaps = 9/270 (3%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||||| || | ||||||| |||||||| Sbjct 17843 ATCTGCACTGCTATTCCAATTTCACTGAGTCAATCATCGAGACAGCTGTTGTATCGTTAC 17902 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||| ||| | | | | ||| | | || || ||| ||||||||||||||| | || Sbjct 17903 ATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGACCCTCATC 17962 Query 129 GTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCT----CT-AACAGA 183 | || |||||||||||| | ||| || |||| | | | || | || || ||| Sbjct 17963 GGTAAGGCCGCCGTTTA-TCGGGGTTTCCTTCAAAACCTAGCTTTTTAAAACTAAATAGA 18021 Query 184 TCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCT-ATACATCGTCTTGCGACTTA 242 | | ||| ||| || ||| |||||| | ||| | | | |||||||| || |||| Sbjct 18022 T-CTGTTACCCTGCCGACACGGGGCAGACATCA-CACTTAATACATCGATTTTTATCTTA 18079 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCG 272 ||| | || |||||| |||||||||| Sbjct 18080 GCAAAGTGCTCTGTTTTAACTAAACAGTCG 18109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062384329600