Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1098 300 3e-79 seq909 273 3e-71 >seq1098 Length=7876 Score = 300 bits (332), Expect = 3e-79 Identities = 223/258 (86%), Gaps = 2/258 (1%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4987 TACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 5046 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||| | |||||||| |||| || ||| |||||||| ||||||||||||| Sbjct 5047 ACCTGTTATTGCCGCGCACTTCCATCGGCTTGA-GCCGATAGTCCCCCTAAGAAGCCAGC 5105 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 || | | | || |||||||||| || |||||||||||||||||| ||||| Sbjct 5106 GGCCCGCAAATGCGGACCGGGCTATTTAAG-GGCCGAGGTCTCGTTCGTTATCGCAATTA 5164 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 | ||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| Sbjct 5165 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCATCCAAAAGATCAAGA 5224 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 5225 AAGAGCTCTCAATCTGTC 5242 >seq909 Length=27335 Score = 273 bits (302), Expect = 3e-71 Identities = 180/198 (91%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||| ||||||||||||| || ||||| ||||||||||||||||| || Sbjct 6672 ACCTGTTATTGCCTCGTACTTCCATTGGCTTGA-GCCAAAAGTCCCTCTAAGAAGCCGGC 6730 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 || ||| |||| | |||||||||||||||| ||||||||||||||||||| ||||| Sbjct 6731 GGCCGACCGAAGTCAACCGGGCTATTTAGCAGGTCAAGGTCTCGTTCGTTATCGCAATTA 6790 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 6791 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATACAATCAAGA 6850 Query 241 AAGAGCTATCAATCTGTC 258 |||||||||||||||||| Sbjct 6851 AAGAGCTATCAATCTGTC 6868 Score = 100 bits (110), Expect = 5e-19 Identities = 58/60 (97%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6041 TACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 6100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796788614475