Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq1098 300 3e-79
seq909 273 3e-71
>seq1098
Length=7876
Score = 300 bits (332), Expect = 3e-79
Identities = 223/258 (86%), Gaps = 2/258 (1%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4987 TACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 5046
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||| | |||||||| |||| || ||| |||||||| |||||||||||||
Sbjct 5047 ACCTGTTATTGCCGCGCACTTCCATCGGCTTGA-GCCGATAGTCCCCCTAAGAAGCCAGC 5105
Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
|| | | | || |||||||||| || |||||||||||||||||| |||||
Sbjct 5106 GGCCCGCAAATGCGGACCGGGCTATTTAAG-GGCCGAGGTCTCGTTCGTTATCGCAATTA 5164
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
| ||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||
Sbjct 5165 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCATCCAAAAGATCAAGA 5224
Query 241 AAGAGCTATCAATCTGTC 258
||||||| ||||||||||
Sbjct 5225 AAGAGCTCTCAATCTGTC 5242
>seq909
Length=27335
Score = 273 bits (302), Expect = 3e-71
Identities = 180/198 (91%), Gaps = 1/198 (1%)
Strand=Plus/Plus
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||| ||||||||||||| || ||||| ||||||||||||||||| ||
Sbjct 6672 ACCTGTTATTGCCTCGTACTTCCATTGGCTTGA-GCCAAAAGTCCCTCTAAGAAGCCGGC 6730
Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
|| ||| |||| | |||||||||||||||| ||||||||||||||||||| |||||
Sbjct 6731 GGCCGACCGAAGTCAACCGGGCTATTTAGCAGGTCAAGGTCTCGTTCGTTATCGCAATTA 6790
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 6791 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATACAATCAAGA 6850
Query 241 AAGAGCTATCAATCTGTC 258
||||||||||||||||||
Sbjct 6851 AAGAGCTATCAATCTGTC 6868
Score = 100 bits (110), Expect = 5e-19
Identities = 58/60 (97%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6041 TACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 6100
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796788614475
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |