Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq909 100 2e-19 seq1098 82.4 5e-14 >seq909 Length=27335 Score = 100 bits (110), Expect = 2e-19 Identities = 81/93 (87%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 32 AGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG 91 ||||| | || ||| |||||| ||||||| || ||||||||| ||||||||||| ||| Sbjct 5842 AGCCAGTCCC--AAGGCCTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTG 5897 Query 92 TACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||||||||||||||| ||||||||||| Sbjct 5898 TACAAAGGGCAGGGACGTAAT-CAACGCAAGCT 5929 >seq1098 Length=7876 Score = 82.4 bits (90), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 3/74 (4%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | ||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 4794 TCCGAAGGC-CTCACCGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 4850 Query 99 GGCAGGGACGTAAT 112 |||||||||||||| Sbjct 4851 GGCAGGGACGTAAT 4864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300795840500