Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1098 416 5e-114 seq909 331 2e-88 >seq1098 Length=7876 Score = 416 bits (460), Expect = 5e-114 Identities = 266/290 (92%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 39 TAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACTATCGGCTCAAGC 98 ||||||||| || |||| || ||||| ||| |||||||||| |||||||||||||||||| Sbjct 5133 TAAATAGCCCGGTCCGCATTTGCGGGCCGCTGGCTTCTTAGGGGGACTATCGGCTCAAGC 5074 Query 99 CGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGC 158 |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5073 CGATGGAAGTGCGCGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGC 5014 Query 159 GCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTG 218 ||||||||||||||| |||| ||||| |||||||||||||| ||||| ||||||||||| Sbjct 5013 GCGCTACACTGACAGGGCCAGCGAGTACATCACCTTGGCCGAGAGGTCCGGGTAATCTTG 4954 Query 219 TTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCC 278 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4953 TTAAACCCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCC 4894 Query 279 TAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||| || || ||||||||| || | |||||||||||||||||||||| Sbjct 4893 TAGTAGGCACGAGTCATCAGCTCGTGCCGATTACGTCCCTGCCCTTTGTA 4844 >seq909 Length=27335 Score = 331 bits (366), Expect = 2e-88 Identities = 195/203 (96%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 185 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 6100 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTA 6041 Query 186 CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 245 |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 6040 CATCACCTTGGCCGAAAGGTCTGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAG 5981 Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305 ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct 5980 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCAAGTCATCAGCTTGCGT 5921 Query 306 TGATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||||| Sbjct 5920 TGATTACGTCCCTGCCCTTTGTA 5898 Score = 120 bits (132), Expect = 6e-25 Identities = 90/106 (85%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||| ||||||||||||||| || ||| || || |||||||||||||| Sbjct 6777 GAACGAGACCTTGACCTGCTAAATAGCCCGGTTGACTTCGGTCGGCCGCCGGCTTCTTAG 6718 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 125 ||||||| | |||||||||| |||||||| ||||||||||||||| Sbjct 6717 AGGGACTTTTGGCTCAAGCCAATGGAAGTACGAGGCAATAACAGGT 6672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947186028800