Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq1098 416 5e-114
seq909 331 2e-88
>seq1098
Length=7876
Score = 416 bits (460), Expect = 5e-114
Identities = 266/290 (92%), Gaps = 0/290 (0%)
Strand=Plus/Minus
Query 39 TAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACTATCGGCTCAAGC 98
||||||||| || |||| || ||||| ||| |||||||||| ||||||||||||||||||
Sbjct 5133 TAAATAGCCCGGTCCGCATTTGCGGGCCGCTGGCTTCTTAGGGGGACTATCGGCTCAAGC 5074
Query 99 CGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGC 158
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5073 CGATGGAAGTGCGCGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGC 5014
Query 159 GCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTG 218
||||||||||||||| |||| ||||| |||||||||||||| ||||| |||||||||||
Sbjct 5013 GCGCTACACTGACAGGGCCAGCGAGTACATCACCTTGGCCGAGAGGTCCGGGTAATCTTG 4954
Query 219 TTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCC 278
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4953 TTAAACCCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCC 4894
Query 279 TAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||||| || || ||||||||| || | ||||||||||||||||||||||
Sbjct 4893 TAGTAGGCACGAGTCATCAGCTCGTGCCGATTACGTCCCTGCCCTTTGTA 4844
>seq909
Length=27335
Score = 331 bits (366), Expect = 2e-88
Identities = 195/203 (96%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 185
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 6100 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTA 6041
Query 186 CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 245
|||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 6040 CATCACCTTGGCCGAAAGGTCTGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAG 5981
Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305
||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 5980 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCAAGTCATCAGCTTGCGT 5921
Query 306 TGATTACGTCCCTGCCCTTTGTA 328
|||||||||||||||||||||||
Sbjct 5920 TGATTACGTCCCTGCCCTTTGTA 5898
Score = 120 bits (132), Expect = 6e-25
Identities = 90/106 (85%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||| ||||||||||||||| || ||| || || ||||||||||||||
Sbjct 6777 GAACGAGACCTTGACCTGCTAAATAGCCCGGTTGACTTCGGTCGGCCGCCGGCTTCTTAG 6718
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 125
||||||| | |||||||||| |||||||| |||||||||||||||
Sbjct 6717 AGGGACTTTTGGCTCAAGCCAATGGAAGTACGAGGCAATAACAGGT 6672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947186028800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |