Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq1098 286 6e-75
seq909 178 2e-42
>seq1098
Length=7876
Score = 286 bits (316), Expect = 6e-75
Identities = 238/283 (84%), Gaps = 10/283 (4%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||
Sbjct 1209 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 1152
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| |||||||||||| |||| |||||||||||||||||||||||||||| ||||
Sbjct 1151 GCCGCGACGCTACCATCTGCCGGATAATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 1092
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTC-GGCCCCGA 178
||||| |||||| | || |||| ||||||| ||||||||||||| |||| |||| |
Sbjct 1091 GAACGCGGTGATACCGCCCCGCACGTCGTAGTTGGATACGAATAGGCCTTCGGGCCATGG 1032
Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCC---GCGGAAGCGCGGGGCGCTCAGCTGGCGGA 235
|||| ||||||| ||| |||| | ||| | | || | | ||| ||| |||||||||
Sbjct 1031 ACCTCAGCAGGCTGGCGACGGCC--CCCAGGGAGAAACCCCTGGGAGCT-GGCTGGCGGA 975
Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||||| ||||| |||| ||||| |||||| ||||||||||
Sbjct 974 TTGCAATGTCACCTCGCGCGGGGATGAATCCTCTGCAGACGAC 932
>seq909
Length=27335
Score = 178 bits (196), Expect = 2e-42
Identities = 144/170 (85%), Gaps = 7/170 (4%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||||| ||||||||||||||||| |||||||||||| ||
Sbjct 180 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCGGTCTGACCAGGCGGT 123
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| || ||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 122 GCCGCGACGCCACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 63
Query 121 GAACGGGGTGAT---TCTCTCCTGCACATCGTAGTCGGATACGAATAGGC 167
| | ||| || | | || || | ||||||||||||||| ||||||
Sbjct 62 G--CCGGGACATCGGGCGCCCCCGCGCGTCGTAGTCGGATACGCATAGGC 15
Score = 109 bits (120), Expect = 9e-22
Identities = 94/115 (82%), Gaps = 5/115 (4%)
Strand=Plus/Minus
Query 56 GCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCA 115
|| ||||||||| || ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 10084 GCGGTGCCGCGACGCCACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCG 10025
Query 116 TGCCAGAACGGGGTGAT---TCTCTCCTGCACATCGTAGTCGGATACGAATAGGC 167
|||| | | ||| || | | || || | ||||||||||||||| ||||||
Sbjct 10024 TGCCGG--CCGGGACATCGGGCGCCCCCGCGCGTCGTAGTCGGATACGCATAGGC 9972
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819188294400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |