Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1098 286 6e-75 seq909 178 2e-42 >seq1098 Length=7876 Score = 286 bits (316), Expect = 6e-75 Identities = 238/283 (84%), Gaps = 10/283 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 1209 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 1152 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| |||| |||||||||||||||||||||||||||| |||| Sbjct 1151 GCCGCGACGCTACCATCTGCCGGATAATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 1092 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTC-GGCCCCGA 178 ||||| |||||| | || |||| ||||||| ||||||||||||| |||| |||| | Sbjct 1091 GAACGCGGTGATACCGCCCCGCACGTCGTAGTTGGATACGAATAGGCCTTCGGGCCATGG 1032 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCC---GCGGAAGCGCGGGGCGCTCAGCTGGCGGA 235 |||| ||||||| ||| |||| | ||| | | || | | ||| ||| ||||||||| Sbjct 1031 ACCTCAGCAGGCTGGCGACGGCC--CCCAGGGAGAAACCCCTGGGAGCT-GGCTGGCGGA 975 Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||| ||||| |||| ||||| |||||| |||||||||| Sbjct 974 TTGCAATGTCACCTCGCGCGGGGATGAATCCTCTGCAGACGAC 932 >seq909 Length=27335 Score = 178 bits (196), Expect = 2e-42 Identities = 144/170 (85%), Gaps = 7/170 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||| |||||||||||| || Sbjct 180 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCGGTCTGACCAGGCGGT 123 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| || ||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 122 GCCGCGACGCCACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 63 Query 121 GAACGGGGTGAT---TCTCTCCTGCACATCGTAGTCGGATACGAATAGGC 167 | | ||| || | | || || | ||||||||||||||| |||||| Sbjct 62 G--CCGGGACATCGGGCGCCCCCGCGCGTCGTAGTCGGATACGCATAGGC 15 Score = 109 bits (120), Expect = 9e-22 Identities = 94/115 (82%), Gaps = 5/115 (4%) Strand=Plus/Minus Query 56 GCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCA 115 || ||||||||| || ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 10084 GCGGTGCCGCGACGCCACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCG 10025 Query 116 TGCCAGAACGGGGTGAT---TCTCTCCTGCACATCGTAGTCGGATACGAATAGGC 167 |||| | | ||| || | | || || | ||||||||||||||| |||||| Sbjct 10024 TGCCGG--CCGGGACATCGGGCGCCCCCGCGCGTCGTAGTCGGATACGCATAGGC 9972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819188294400