Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1098 847 0.0 seq909 814 0.0 >seq1098 Length=7876 Score = 847 bits (938), Expect = 0.0 Identities = 490/504 (97%), Gaps = 0/504 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct 5957 GTACTCATTCCAATTACGAGACCCAAAAGAGCCCCGTATCAGTATTTATTGTCACTACCT 6016 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6017 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 6076 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 6077 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGCCACCATGGTA 6136 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6137 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 6196 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||| Sbjct 6197 CAAGGCCATGCGATTCGCTTAGTTATTATGATTCACCAAGGAGCCCCGAAGGGCGTTGGT 6256 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 6257 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGAGGTTTTTAGCATGTATTAGCTCTAG 6316 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6317 AATTACCACAGGTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 6376 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||| Sbjct 6377 GCCATTCGCAGTTTCACAGTATAAAGTGCTTATACTTAGACATGCATGGCTTAATCTTTG 6436 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 6437 AGACAAGCATATGACTACTGGCAG 6460 >seq909 Length=27335 Score = 814 bits (902), Expect = 0.0 Identities = 485/505 (96%), Gaps = 3/505 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||| Sbjct 7585 GTACTCATTCCAATTACGAGACCCGAAAGAGCCCCGTATCAGTATTTATTGTCACTACCT 7644 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7645 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 7704 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||| ||||||||||||||||||||||||| | ||||| ||| Sbjct 7705 TCTCAGGCTCCCTCTCCGGAATAGAACCCTAATTCCCCGTTACCCGTTAAGACCATTGTA 7764 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 7765 GGCCACTATCCTACAATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 7824 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCC-CGAAGGGCGTTGG 299 |||||||||||||||||| |||||||||||||||||||| ||||| |||||||| |||| Sbjct 7825 CAAGGCCATGCGATTCGTGAAGTTATTATGAATCACCAAAAAGCCCACGAAGGGCATTGG 7884 Query 300 TTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 7885 TTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTTGCATGTATTAGCTCTA 7944 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 7945 GAATTACCACGGTTATCCAGGTA--AAGGTACTATCAAATAAACGATAACTGATTTAATG 8002 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct 8003 AGCCATTCGCAGTTTCACCGTATAGTTTGCTTATACTTAGACATGCATGGCTTAATCTTT 8062 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 8063 GAGACAAGCATATGACTACTGGCAG 8087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510377721600