Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq73 239 4e-58 seq377 82.4 6e-11 >seq73 Length=89549 Score = 239 bits (264), Expect = 4e-58 Identities = 585/875 (67%), Gaps = 14/875 (2%) Strand=Plus/Minus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 ||||| || ||||| ||||| ||||||||||| ||||| || || || | ||||||||| Sbjct 17720 GGAAGAGCCAGAGAGGCGAGATTGCAGACAGCGATCTCATCTGGGGCACTGTACTCGACA 17661 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 ||||| ||||||||||| || || || || |||| |||| || || ||||| Sbjct 17660 ATTTCCGTGCACAGATTGGAGCTCCGGATTGTCCCCAGGTTCTTCTGGTTGCTCTTCTTG 17601 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||||| ||||||||||| | ||| || ||||| |||||||| || | || | ||| Sbjct 17600 TTGCAGGCATCCTTGTAAAGCATATAAGGAGTCCCGGTCTCGGTCTGTGCTTCTAGGATC 17541 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGT---ACGTACCGCCCTACCT-TTGCGTTCGTA 66237 || | ||| | | ||||| ||||| ||| ||| | | ||| || | || || Sbjct 17540 GCATACCACAACTTCTGGGCCTTGACCGTCTGACG-ACCTCG-TCCCTCTTTC--TCATA 17485 Query 66238 ATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTG 66297 ||||| |||||| ||||| || || | || || | || | || || || Sbjct 17484 CTGTTCATAGAGGGCATCGAATTCCTCGCCATAGACATCAGCAAGGCCCGGTGCCTCATG 17425 Query 66298 TGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTAT 66357 ||||| | ||| | ||| || | || || ||||| | ||| |||||||| || | Sbjct 17424 AGGACAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACGTCTCATGAATAGATCCGGAGT 17365 Query 66358 CCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAA 66417 ||| || || || || | || || || || ||| || | ||||| || || | || Sbjct 17364 CCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCTTTCCGTGGTTCTTTCTCAG 17305 Query 66418 GTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCAT 66477 || || | || |||| || || |||||||| ||||| |||||||| || | || Sbjct 17304 GTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACCGGG 17245 Query 66478 ACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGG 66537 ||| || |||||| ||||| || || || || |||||||||||||| | ||| || Sbjct 17244 ACGCTTATTGCCACCCTGGTCCACATAACGGGCAGTGTTGTTGAAGACACGAAGCATGGG 17185 Query 66538 TACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATC 66597 | ||| || || || |||| ||||| ||| | || ||| || || || || Sbjct 17184 AATGAGACCATTGGAAGTGCCGTTGGTCCCGGCAATATAGGAACCAGTAGCACGAATGCA 17125 Query 66598 GTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACT 66655 ||| | || || |||||||| || || ||||| ||||| ||||||| || | | | Sbjct 17124 ATGAGCGTTGAGGCCAATACCGCCAGCAGTCTTGGAGATCATAGCACAAGTCTTGAGAGT 17065 Query 66656 GTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGT 66715 ||| | | || || |||||| ||| | || ||| | | | ||||||| | | Sbjct 17064 GTC--GTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAAGCATGAGGACAAT 17007 Query 66716 TGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGA 66775 || |||| || ||| |||| ||| || || || | ||||| || ||| | | | Sbjct 17006 TGAGGTTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGTGAAGCACTTCTGG 16947 Query 66776 GACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-C 66834 |||||| ||||| ||||| || | || |||| || ||||| || || | || | Sbjct 16946 GACATGAGGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCCATGGATGCCAACTGCC 16887 Query 66835 ACATCGCATCAGGAGGTATTGAGGCCGTTCGACCA 66869 ||| ||||| || | || ||| || | ||| ||| Sbjct 16886 ACA-CGCATGAGCATGTGTTGCGGTCTCTCGGCCA 16853 Score = 87.8 bits (96), Expect = 1e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 65421 GATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGG 65480 |||||| ||||||||| || || | || ||||||||| ||||||||||||||| | Sbjct 18283 GATTGACGACTTGGAATTCACCAGCCAACACACGACGGGAGTAGATGTTGGACGTGTATG 18224 Query 65481 GTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGA 65540 | || ||| |||| ||||||| | ||||| | || |||||||| ||||| || || | Sbjct 18223 GCTCGAAGCATTCGTTGTTGCCCAAGATTTGAGAGGTGGATGCAGTAGGCATAGGGGCAA 18164 Query 65541 C 65541 | Sbjct 18163 C 18163 >seq377 Length=202478 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 61717 ATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGA 61776 ||||| |||||||| |||| || |||||||| ||| | || | |||||||| | Sbjct 91078 ATCGAGAAGGAATTTTTGACAGATGCTTTGCCTGTCGCTCTGCTTGGCATGAACGCCAAA 91137 Query 61777 CTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAG 61836 || ||| || |||||||| || |||||||||||||| | | | | || | ||| Sbjct 91138 CTGATGCAACAATATATTGAGTTCGTTGCCGACCGTCTTCTCCTTGCCCTCGGAAACAAG 91197 Query 61837 CGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAG 61896 | ||| ||| | | || || || || ||||||| || || ||| || ||| Sbjct 91198 AAGTACTACAATGCCCAGAATCCTTTCAGCTTTATGGACAACATCTCATTGGCGGGAAAG 91257 Query 61897 ACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 || || || |||||||| ||||| || || || || Sbjct 91258 ACAAACTTCTTCGAGAAGCGTGTCGGTGATTACCA 91292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397560853094000