Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20agropyri_20[genbank_20GCA_5F900074905.1_202016-10- 26] 508 sequences; 52,477,121 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq377 116 9e-24 >seq377 Length=77695 Score = 116 bits (128), Expect = 9e-24 Identities = 198/282 (70%), Gaps = 10/282 (4%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || |||| |||| ||||| ||| ||||||||||||| | | |||||||| Sbjct 60178 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGT 60119 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| ||||| |||| | | | | ||| | | ||||| ||| ||||||||||||| Sbjct 60118 ATCGTTAAATCATTCATGCAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGA 60059 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATC-AAG---AGCTT---CGCGTT 179 || | || | || ||||||| || | ||||| ||| || ||| ||||| || Sbjct 60058 CCCTCATAGGTAAGGCCGCCATTGATCGGGGTTTCCTTCGAAGCCAAGCTTATATTAGTC 59999 Query 180 AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT 239 | || | | ||| |||||| ||| || ||||||| |||||| | |||| | | | Sbjct 59998 AACTTAGCAAATCCGTTAACCAGCCGACATCGGGCAGAAATCACACTCAATACTTTGATT 59939 Query 240 T-TCGTGTT--TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | | | || ||||||||||| |||||| | |||||||||| Sbjct 59938 TATTATCTTACTGCAGAGTGCTTTGTTTTAATTAAACAGTCG 59897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260793595136